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View Structure Prediction Details

Protein: YMR306C-A
Organism: Saccharomyces cerevisiae
Length: 129 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YMR306C-A.

Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGTSSLYQL LKITFFFYPY ATVLKVGKVG VVVRIVDGAF GPVSLLFWLL GWKIPSKRVP  60
   61 SSNSCGLDTK SPAKNGAMSI KRSTPSITKY REKYFETILL LNALCFRVKI LLCAIILLGF 120
  121 IQNSTIVCQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.370 a.7.12 Description not found.
View Download 0.332 e.34.1 NSP3 homodimer
View Download 0.332 e.34.1 NSP3 homodimer
View Download 0.316 a.25.1 Ferritin-like
View Download 0.279 d.221.1 Nuclease A inhibitor (NuiA)
View Download 0.272 a.29.2 Bromodomain
View Download 0.272 a.29.2 Bromodomain
View Download 0.271 a.47.2 t-snare proteins
View Download 0.271 a.47.2 t-snare proteins
View Download 0.231 c.23.1 CheY-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle