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View Structure Prediction Details

Protein: YMR290W-A
Organism: Saccharomyces cerevisiae
Length: 115 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YMR290W-A.

Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFKVGCDNF SSSNFSTQVV CSPSGAALFC FEVLFSSTTG SSVDSESLER LFDGVAILLL  60
   61 LILLSLSNYY SIQLSNSYVL KYRVYTIKSH LIAKANIEKK KKKKRKRQIK NFQFG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.710 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.710 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.635 c.78.2 Aspartate/glutamate racemase
View Download 0.635 c.78.2 Aspartate/glutamate racemase
View Download 0.594 d.8.1 Urease, gamma-subunit
View Download 0.594 d.8.1 Urease, gamma-subunit
View Download 0.562 d.58.7 RNA-binding domain, RBD
View Download 0.562 d.58.7 RNA-binding domain, RBD
View Download 0.545 d.21.1 Diaminopimelate epimerase-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle