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View Structure Prediction Details

Protein: URA10
Organism: Saccharomyces cerevisiae
Length: 227 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for URA10.

Description E-value Query
Range
Subject
Range
gi|207342093 - gi|207342093|gb|EDZ69964.1| YMR271Cp-like protein [Saccharomyces cerevisiae AWRI1631]
PYRX_YEAST - Orotate phosphoribosyltransferase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=URA1...
URA10 - Minor orotate phosphoribosyltransferase (OPRTase) isozyme that catalyzes the fifth enzymatic step in...
7.0E-53 [1..227] [1..227]
PYRE_KLULA - Orotate phosphoribosyltransferase OS=Kluyveromyces lactis GN=URA5 PE=3 SV=1
PYRE_KLULA - Orotate phosphoribosyltransferase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 /...
3.0E-49 [5..226] [2..223]
gi|229356093, gi... - gi|229506988|ref|ZP_04396496.1| orotate phosphoribosyltransferase [Vibrio cholerae BX 330286], gi|22...
gi|229512475, gi... - gi|229512475|ref|ZP_04401947.1| orotate phosphoribosyltransferase [Vibrio cholerae TMA 21], gi|22935...
gi|229516305, gi... - gi|229516305|ref|ZP_04405753.1| orotate phosphoribosyltransferase [Vibrio cholerae RC9], gi|22934673...
gi|229369151, gi... - gi|229606496|ref|YP_002877144.1| orotate phosphoribosyltransferase [Vibrio cholerae MJ-1236], gi|229...
gi|124118745, gi... - gi|153222605|ref|ZP_01953309.1| orotate phosphoribosyltransferase [Vibrio cholerae MAK 757], gi|1241...
gi|75830214, gi|... - gi|75830214|ref|ZP_00759496.1| COG0461: Orotate phosphoribosyltransferase [Vibrio cholerae MO10], gi...
gi|126509508, gi... - gi|153819944|ref|ZP_01972611.1| orotate phosphoribosyltransferase [Vibrio cholerae NCTC 8457], gi|12...
gi|229509358, gi... - gi|229509358|ref|ZP_04398841.1| orotate phosphoribosyltransferase [Vibrio cholerae B33], gi|22935367...
PYRE_VIBCH - (Q9KVD5) Orotate phosphoribosyltransferase (EC 2.4.2.10) (OPRT) (OPRTase)
gi|9654618, gi|1... - gi|9654618|gb|AAF93387.1| orotate phosphoribosyltransferase [Vibrio cholerae O1 biovar El Tor str. N...
gi|150422455, gi... - gi|254291598|ref|ZP_04962387.1| orotate phosphoribosyltransferase [Vibrio cholerae AM-19226], gi|197...
gi|227080432, gi... - gi|227080432|ref|YP_002808983.1| orotate phosphoribosyltransferase [Vibrio cholerae M66-2], gi|22700...
6.0E-49 [8..227] [2..214]
gi|3228687 - gi|3228687|gb|AAC62627.1| orotidine-5'-monophosphate pyrophosphorylase [Ajellomyces capsulatus]
gi|225562276 - gi|225562276|gb|EEH10555.1| orotidine-5'-monophosphate pyrophosphorylase [Ajellomyces capsulatus G18...
2.0E-47 [3..225] [6..240]
PYRE_YARLI - Orotate phosphoribosyltransferase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=URA5 PE=3 SV=1
PYRE_YARLI - Orotate phosphoribosyltransferase OS=Yarrowia lipolytica GN=URA5 PE=3 SV=1
7.0E-47 [8..225] [1..215]
PYRE_SALCH - Orotate phosphoribosyltransferase OS=Salmonella choleraesuis GN=pyrE PE=3 SV=1
PYRE_SALCH - Orotate phosphoribosyltransferase OS=Salmonella choleraesuis (strain SC-B67) GN=pyrE PE=3 SV=1
lcl|NC_016856.1_... - [gene=pyrE] [protein=orotate phosphoribosyltransferase] [protein_id=YP_005239975.1] [location=comple...
PYRE_SALHS - Orotate phosphoribosyltransferase OS=Salmonella heidelberg (strain SL476) GN=pyrE PE=3 SV=1
PYRE_SALSV - Orotate phosphoribosyltransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=pyrE PE=3 SV=1
gi|197262316, gi... - gi|197262316|ref|ZP_03162390.1| orotate phosphoribosyltransferase [Salmonella enterica subsp. enteri...
PYRE_SALDC - Orotate phosphoribosyltransferase OS=Salmonella dublin (strain CT_02021853) GN=pyrE PE=3 SV=1
gi|205350134, gi... - gi|205350134|gb|EDZ36765.1| orotate phosphoribosyltransferase [Salmonella enterica subsp. enterica s...
gi|195632230, gi... - gi|195632230|gb|EDX50714.1| orotate phosphoribosyltransferase [Salmonella enterica subsp. enterica s...
gi|205344664, gi... - gi|205344664|gb|EDZ31428.1| orotate phosphoribosyltransferase [Salmonella enterica subsp. enterica s...
PYRE_SALNS - Orotate phosphoribosyltransferase OS=Salmonella newport (strain SL254) GN=pyrE PE=3 SV=1
PYRE_SALPB - Orotate phosphoribosyltransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=pyrE PE...
gi|205325874, gi... - gi|205325874|gb|EDZ13713.1| orotate phosphoribosyltransferase [Salmonella enterica subsp. enterica s...
gi|167995206, gi... - gi|205327073|gb|EDZ13837.1| orotate phosphoribosyltransferase [Salmonella enterica subsp. enterica s...
PYRE_SALCH - Orotate phosphoribosyltransferase OS=Salmonella choleraesuis GN=pyrE PE=3 SV=1
gi|197291365, gi... - gi|197291365|gb|EDY30717.1| orotate phosphoribosyltransferase [Salmonella enterica subsp. enterica s...
gi|168241912, gi... - gi|205338713|gb|EDZ25477.1| orotate phosphoribosyltransferase [Salmonella enterica subsp. enterica s...
PYRE_SALPB - Orotate phosphoribosyltransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=pyrE PE...
PYRE_SALTY - Orotate phosphoribosyltransferase OS=Salmonella typhimurium GN=pyrE PE=1 SV=3
PYRE_SALPC - Orotate phosphoribosyltransferase OS=Salmonella paratyphi C (strain RKS4594) GN=pyrE PE=3 SV=1
PYRE_SALTY - Orotate phosphoribosyltransferase OS=Salmonella typhimurium GN=pyrE PE=1 SV=3
gi|200387791, gi... - gi|200387791|ref|ZP_03214403.1| orotate phosphoribosyltransferase [Salmonella enterica subsp. enteri...
PYRE_SALTY - Orotate phosphoribosyltransferase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN...
gi|204928498, gi... - gi|204928498|ref|ZP_03219697.1| orotate phosphoribosyltransferase [Salmonella enterica subsp. enteri...
PYRE_SALG2 - Orotate phosphoribosyltransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=pyrE PE=3...
PYRE_SALEP - Orotate phosphoribosyltransferase OS=Salmonella enteritidis PT4 (strain P125109) GN=pyrE PE=3 SV=1
8.0E-47 [8..227] [1..213]
gi|165926147, gi... - gi|165926147|ref|ZP_02221979.1| orotate phosphoribosyltransferase [Yersinia pestis biovar Orientalis...
PYRE_YERPS - Orotate phosphoribosyltransferase OS=Yersinia pseudotuberculosis GN=pyrE PE=3 SV=1
PYRE_YERPG - Orotate phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=pyrE PE=3 SV=1
gi|166205102, gi... - gi|166213700|ref|ZP_02239735.1| orotate phosphoribosyltransferase [Yersinia pestis biovar Antiqua st...
PYRE_YERP3 - Orotate phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=...
gi|165989643, gi... - gi|166011497|ref|ZP_02232395.1| orotate phosphoribosyltransferase [Yersinia pestis biovar Antiqua st...
gi|166962881, gi... - gi|167418887|ref|ZP_02310640.1| orotate phosphoribosyltransferase [Yersinia pestis biovar Orientalis...
gi|167402101, gi... - gi|167402101|ref|ZP_02307578.1| orotate phosphoribosyltransferase [Yersinia pestis biovar Antiqua st...
PYRE_YERPY - Orotate phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=pyrE...
gi|167054351, gi... - gi|167426662|ref|ZP_02318415.1| orotate phosphoribosyltransferase [Yersinia pestis biovar Mediaevali...
gi|21956759, gi|... - gi|22124016|ref|NP_667439.1| orotate phosphoribosyltransferase [Yersinia pestis KIM], gi|21956759|gb...
PYRE_YERPS - Orotate phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=pyrE...
gi|45434766, gi|... - gi|45439911|ref|NP_991450.1| orotate phosphoribosyltransferase [Yersinia pestis biovar Microtus str....
gi|16120398, gi|... - gi|218927266|ref|YP_002345141.1| orotate phosphoribosyltransferase [Yersinia pestis CO92], gi|161203...
gi|150260891, gi... - gi|150260891|ref|ZP_01917619.1| orotate phosphoribosyltransferase [Yersinia pestis CA88-4125], gi|14...
PYRE_YERPP - Orotate phosphoribosyltransferase OS=Yersinia pestis (strain Pestoides F) GN=pyrE PE=3 SV=1
gi|165936301, gi... - gi|89103895|ref|ZP_01176455.1| COG0461: Orotate phosphoribosyltransferase [Yersinia pestis biovar Or...
PYRE_YERPA - Orotate phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=pyrE PE=3 SV=1
gi|229706605, gi... - gi|229836157|ref|ZP_04456325.1| orotate phosphoribosyltransferase [Yersinia pestis Pestoides A], gi|...
PYRE_YERPN - Orotate phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=pyrE PE=3 SV=1
gi|229839894, gi... - gi|229839894|ref|ZP_04460053.1| orotate phosphoribosyltransferase [Yersinia pestis biovar Orientalis...
gi|229690286, gi... - gi|229841976|ref|ZP_04462131.1| orotate phosphoribosyltransferase [Yersinia pestis biovar Orientalis...
PYRE_YERPE - Orotate phosphoribosyltransferase OS=Yersinia pestis GN=pyrE PE=3 SV=1
PYRE_YERPB - Orotate phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=pyrE ...
1.0E-46 [8..227] [1..213]

Back

Predicted Domain #1
Region A:
Residues: [1-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASTTSLEE YQKTFLELGL ECKALRFGSF KLNSGRQSPY FFNLSLFNSG KLLANLATAY  60
   61 ATAIIQSELK FDVIFGPAYK GIPLAAIVCV KLAEIGGTKF QGIQYAFNRK KVKDHGEGGI 120
  121 IVGASLEDKR VLIIDDVMTA GTAINEAFEI ISIAQGRVVG CIVALDRQEV IHESDPERTS 180
  181 ATQSVSKRYN VPVLSIVSLT QVVQFMGNRL SPEQKSAIEN YRKAYGI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 509.071898
Match: 1lh0A_
Description: Orotate PRTase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
adenine phosphoribosyltransferase activity 3.1748712918814 bayes_pls_golite062009
uracil phosphoribosyltransferase activity 3.0470646511978 bayes_pls_golite062009
hypoxanthine phosphoribosyltransferase activity 2.97347277288245 bayes_pls_golite062009
transferase activity 2.73727660668741 bayes_pls_golite062009
transferase activity, transferring pentosyl groups 2.53679639481311 bayes_pls_golite062009
catalytic activity 2.30431811394775 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 2.21367942706564 bayes_pls_golite062009
orotate phosphoribosyltransferase activity 2.02298774328915 bayes_pls_golite062009
ribose phosphate diphosphokinase activity 1.51875493459374 bayes_pls_golite062009
nucleobase binding 1.28671115202467 bayes_pls_golite062009
purine binding 1.24786927434743 bayes_pls_golite062009
amidophosphoribosyltransferase activity 0.932396739123353 bayes_pls_golite062009
binding 0.847513071499147 bayes_pls_golite062009
diphosphotransferase activity 0.749909396904601 bayes_pls_golite062009
nucleic acid binding 0.552133387792911 bayes_pls_golite062009
DNA binding 0.439741935655503 bayes_pls_golite062009
transcription regulator activity 0.396538943915776 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle