| Protein: | RSN1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 953 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RSN1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..953] | [1..953] |
|
|
0.0 | [13..916] | [2..867] |
|
|
0.0 | [18..772] | [3..757] |
|
Region A: Residues: [1-206] |
1 11 21 31 41 51
| | | | | |
1 MNSTNSTNST TTATSTNTST QQVVTSLVSN GTIFGVFVIA FLILRIKLKR IYEPKSSFNL 60
61 INEEKKPEPL PQGVWQWLKP LLKKSDNFVI QQAGLDGYFF LRYLFIIAIY CAVSMSYIFP 120
121 ILLSINASNG NHESGLNQLA YQNVKHRGRY FAHVFCGWIF FWGFLYIIYR ELYFYTSMKQ 180
181 AVLASPRYAK KLSSRTVLFQ TVPKQY
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [207-293] |
1 11 21 31 41 51
| | | | | |
1 LSEEEFSKLF DGVKRVWIAR GSGSIEAMVK ARDNMAIQLE GAETKYLKAA LKKIKKLNKK 60
61 SPQLSVSDNI AEYVPDKKRP HHKINKV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.590 | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.551 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.473 | a.7.1 | Spectrin repeat |
| View | Download | 0.471 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.419 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.368 | a.22.1 | Histone-fold |
| View | Download | 0.364 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.299 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.288 | a.46.1 | Methionine synthase domain |
| View | Download | 0.288 | a.22.1 | Histone-fold |
| View | Download | 0.280 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.278 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.277 | a.7.1 | Spectrin repeat |
| View | Download | 0.276 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.275 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.273 | a.47.2 | t-snare proteins |
| View | Download | 0.266 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.256 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.256 | a.7.1 | Spectrin repeat |
| View | Download | 0.243 | d.55.1 | Ribosomal protein L22 |
| View | Download | 0.235 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.232 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.228 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.221 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.221 | a.64.1 | Saposin |
| View | Download | 0.215 | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.205 | a.22.1 | Histone-fold |
| View | Download | 0.202 | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.200 | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.200 | a.7.1 | Spectrin repeat |
|
Region A: Residues: [294-777] |
1 11 21 31 41 51
| | | | | |
1 AKFFFGKKVD TISYIKEELP KLNQKVKALQ EDHENSSPFN SVFVEFESQY QAQVAAQITT 60
61 YHAPLFMTPV YIGIEPSDVV WFNLRMFWWE RLGREVSAVS AIVALVILWA FPVAFVGMIS 120
121 NITSLTNEVK WLKFIYKLPK QLLGLLTSLA PTVALAVLMS FLPKFIRGMA ITQGAPSKQN 180
181 VEYFTQQAYF AFQVIQVFLV TTLSSAATST VTEIVKEPTK AMDLLASNLP KASNFFMSYV 240
241 ILQGLSISSG ALLQIVPLIL FYVLGAFLDG TVRKKWNRFC GLSSMQWGTA FPVYTNLAVI 300
301 TFSYSIISPL ILLFAAVAFF LLYIAYLYNL TYVYQESPDA RGIYYPRALF QTIVGIYIGQ 360
361 ICLLGLFAVG KGWGPIVLQV IGICVTVLIH LHLSAAFDHL SKVIPVDTMK PLDGVSDTPS 420
421 FKNIYKGIES TKVKKNTFGA NIDMDGIKEL PEFPIKKYHK RSESVTEQQV ENSIFSENTF 480
481 EYQF
|
| Detection Method: | |
| Confidence: | 222.173925 |
| Match: | PF02714 |
| Description: | Domain of unknown function DUF221 |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [778-953] |
1 11 21 31 41 51
| | | | | |
1 NPANEANADG HAINAENLIE DVPLLADGDT MKIPPAPWWK RFLKPHIYYS YKAVKSRLPE 60
61 IYGLVDPDER VNDFDISHAY DYPAVSAQCP ELWIPRDPFG FSKLLISDVS GVVEMNDENA 120
121 TIDENLKFTL RDVPPPYNDV KDEANGEANG EFDTASKENN PFADPKYKEE ESRSAV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [624-696] |
1 11 21 31 41 51
| | | | | |
1 TYVYQESPDA RGIYYPRALF QTIVGIYIGQ ICLLGLFAVG KGWGPIVLQV IGICVTVLIH 60
61 LHLSAAFDHL SKV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [697-953] |
1 11 21 31 41 51
| | | | | |
1 IPVDTMKPLD GVSDTPSFKN IYKGIESTKV KKNTFGANID MDGIKELPEF PIKKYHKRSE 60
61 SVTEQQVENS IFSENTFEYQ FNPANEANAD GHAINAENLI EDVPLLADGD TMKIPPAPWW 120
121 KRFLKPHIYY SYKAVKSRLP EIYGLVDPDE RVNDFDISHA YDYPAVSAQC PELWIPRDPF 180
181 GFSKLLISDV SGVVEMNDEN ATIDENLKFT LRDVPPPYND VKDEANGEAN GEFDTASKEN 240
241 NPFADPKYKE EESRSAV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
