YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YMR244W
Organism: Saccharomyces cerevisiae
Length: 355 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMR244W.

Description E-value Query
Range
Subject
Range
YM79_YEAST - Uncharacterized protein YMR244W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR244W ...
YMR244W - Putative protein of unknown function
0.0 [1..355] [1..355]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [28..318] [48..335]
gi|16118872 - gi|16118872|gb|AAL14637.1|AF418983_1 wmsu1p [Williopsis saturnus var. mrakii]
1.0E-80 [14..318] [105..402]
gi|944922 - gi|944922|gb|AAC49038.1| beta-glucosidase
3.0E-72 [19..317] [124..420]
YBOH_SCHPO - Probable secreted beta-glucosidase C2G2.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) G...
SPBC2G2.17c - beta-glucosidase Psu2
2.0E-69 [56..317] [84..319]

Back

Predicted Domain #1
Region A:
Residues: [1-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLCKLLTPY FLLSILSVGV FTATAAPSPS IQMTENTNQD HHEHAKRGGT CAFPNYDGMV  60
   61 AVQKGGSNGG WAMSPDQECS YGSWCPYACK PGQLMGQWDP SATTYSYPKC QNGGLYCDSN 120
  121 GNLQKPNSDK DYCYDGKGTV IAKNNANSGD VAFCQTVLPG NEAMLIPTLV GSGSKQTLAV 180
  181 PGTDYWASSA SHYYVNAPGV SVEDACQWGS SANPQGNWAP FVAGSNMDDN QNTFVKIGWN 240
  241 PVYLESSCPF KNVKPSFGIR ITCDDESQCE GLPCSIDPSS NGVNEVTSSG GGSSGAGGGN 300
  301 FCVVTARNGA KANIEVFDVG SGSSSKGKRE LNPLDVITTT VTETKYKTVT VTAKT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 8.769551
Match: PF03856
Description: Beta-glucosidase (SUN family)

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle