| Protein: | SKY1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 742 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SKY1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..742] | [1..742] |
|
|
0.0 | [6..734] | [365..1050] |
|
|
0.0 | [89..707] | [182..825] |
|
|
0.0 | [89..707] | [8..645] |
|
|
0.0 | [89..707] | [11..647] |
|
|
0.0 | [8..707] | [33..764] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MGSSINYPGF VTKSAHLADT STDASISCEE ATSSQEAKKN FFQRDYNMMK KAPAPTKSKL 60
61 SLALQTSKSS SSANGTVQED TSSKTEDFST KSIKKKPDSG VESHVSIQSD SGPQSDSDLD 120
121 SDSSISSCD
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.376 | 0.954 | positive regulation of protein import into nucleus | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.376 | 0.954 | positive regulation of protein import into nucleus | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
|
Region A: Residues: [130-372] |
1 11 21 31 41 51
| | | | | |
1 ERNEESLKDY RPGGYHPAFK GEPYKDARYI LVRKLGWGHF STVWLAKDMV NNTHVAMKIV 60
61 RGDKVYTEAA EDEIKLLQRV NDADNTKEDS MGANHILKLL DHFNHKGPNG VHVVMVFEVL 120
121 GENLLALIKK YEHRGIPLIY VKQISKQLLL GLDYMHRRCG IIHTDIKPEN VLMEIGDVEG 180
181 IVQMVEALDK QKREAKRLQR HVSRSSDITA NDSSDEKWAE CQTSMPCGSS SNSKSRSIEK 240
241 DLS
|
| Detection Method: | |
| Confidence: | 89.134302 |
| Match: | 1ckiA_ |
| Description: | Casein kinase-1, CK1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [373-424] |
1 11 21 31 41 51
| | | | | |
1 KRCFRRPRRH TIITGSQPLP SPISSSNFFE MRAHFCGSSH NSFSSVSGNR NI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.330 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.227 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.202 | d.68.3 | SirA-like |
| View | Download | 0.317 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
|
Region A: Residues: [425-469] |
1 11 21 31 41 51
| | | | | |
1 PSSINNNSIN NGIGIKNSNN SFLNSVPHSV TRMFINEDSN DNNNN
|
|
Region B: Residues: [488-503] |
1 11 21 31 41 51
| | | | | |
1 EDIMNTPLHE EQLADS
|
| Detection Method: | |
| Confidence: | 1377.69897 |
| Match: | 1howA_ |
| Description: | Sky1p |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [470-487] |
1 11 21 31 41 51
| | | | | |
1 DNSKNKNNNN NNSNNNNN
|
|
Region B: Residues: [504-560] |
1 11 21 31 41 51
| | | | | |
1 LSTFDISNIS QSSDTNGPYI SNTMDSNSNV STDINSPENL IQIKIADLGN ACWYDEH
|
| Detection Method: | |
| Confidence: | 1377.69897 |
| Match: | 1howA_ |
| Description: | Sky1p |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [561-742] |
1 11 21 31 41 51
| | | | | |
1 YTNSIQTREY RSPEVLLGAP WGCGADIWST ACLIFELITG DFLFEPDEGH SYTKDDDHIA 60
61 QIIELLGELP SYLLRNGKYT RTFFNSRGLL RNISKLKFWP LEDVLTEKYK FSKDEAKEIS 120
121 DFLSPMLQLD PRKRADAGGL VNHPWLKDTL GMEEIRVPDR ELYGSGSDIP GWFEEVRDHK 180
181 RH
|
| Detection Method: | |
| Confidence: | 1377.69897 |
| Match: | 1howA_ |
| Description: | Sky1p |
| Matching Structure (courtesy of the PDB): |
|
