Protein: | TOM40 |
Organism: | Saccharomyces cerevisiae |
Length: | 387 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TOM40.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..387] | [1..387] |
|
6.0E-88 | [37..368] | [7..332] |
|
7.0E-78 | [37..345] | [7..309] |
|
4.0E-73 | [35..373] | [16..341] |
|
1.0E-70 | [35..358] | [6..307] |
|
3.0E-68 | [57..360] | [1..300] |
|
8.0E-68 | [58..359] | [38..320] |
Region A: Residues: [1-158] |
1 11 21 31 41 51 | | | | | | 1 MSAPTPLAEA SQIPTIPALS PLTAKQSKGN FFSSNPISSF VVDTYKQLHS HRQSLELVNP 60 61 GTVENLNKEV SRDVFLSQYF FTGLRADLNK AFSMNPAFQT SHTFSIGSQA LPKYAFSALF 120 121 ANDNLFAQGN IDNDLSVSGR LNYGWDKKNI SKVNLQIS |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [159-227] |
1 11 21 31 41 51 | | | | | | 1 DGQPTMCQLE QDYQASDFSV NVKTLNPSFS EKGEFTGVAV ASFLQSVTPQ LALGLETLYS 60 61 RTDGSAPGD |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.886 | 0.237 | mitochondrial outer membrane translocase complex | d.15.7 | Immunoglobulin-binding domains |
Region A: Residues: [228-387] |
1 11 21 31 41 51 | | | | | | 1 AGVSYLTRYV SKKQDWIFSG QLQANGALIA SLWRKVAQNV EAGIETTLQA GMVPITDPLM 60 61 GTPIGIQPTV EGSTTIGAKY EYRQSVYRGT LDSNGKVACF LERKVLPTLS VLFCGEIDHF 120 121 KNDTKIGCGL QFETAGNQEL LMLQQGLDAD GNPLQALPQL |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.