YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YMR160W
Organism: Saccharomyces cerevisiae
Length: 816 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMR160W.

Description E-value Query
Range
Subject
Range
YM35_YEAST - Uncharacterized protein YMR160W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR160W ...
YMR160W - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
0.0 [1..816] [1..816]

Back

Predicted Domain #1
Region A:
Residues: [1-816]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVVQQKQDK QLQHQTQEQQ QIREDQQEVP PQRPRQQNRW KPWWNSTADD EPNTGRIAEY  60
   61 PNGQGRSSPT TDFQDSVNSN NDNKGIWSKI ASFATSRYRS APIVVDDNTR YSQLNTEQIN 120
  121 FLENEAKDII SKKSKSWCWY EAIPHISNSS NIIDSIDTPG IISVSGTGSA KCPLPLNKYP 180
  181 GEGGNPGYNV FINDSLILPS DNPLNFLHVQ PLRTKVLNTI KNYYNFPNEQ HLYLRQKKTA 240
  241 LLKDKRIIII SVVGDLPEKY EQRSLESQRS AYYLSRKLSQ NLAQEQPQRV LTLSFQCPLH 300
  301 NQDLIPTYKE CVELLNHWAH LFKEVDSIFF VGVYHSVPLT LLLAKYIVQN NEVLEFDENT 360
  361 TVSVLSFQSC LQGYRFWDHS TDFTSNSYNN LGSNSSTNEN DSNDHDSNND FTTKSQQIKE 420
  421 KQLFQGIDKK QQDTLSKIKN YRRIDSSESK LVQDALDWLL FNWDTFRLTF FGKLYDNFMT 480
  481 ISEKLAIDYN HPKILRNLWC NGKYMGIDLK NANNLNLDTD DEATSNINDV HVRTPNFESR 540
  541 LKIPTNRLFE ITLWDILMIT ENLGYKQFIP IINLLSPFFI SRSFNDYTLP PNIRKQYQNS 600
  601 NKIWLQEMDS KWKMNGHQLN YDQREGESLG SSSESLLPEN ISTVKDFLQF VQYQNEKSSD 660
  661 FVRIYSDIYD DDKVYKCFLY NTIFTKNPLS RKHLRLNIDL DTPTSILNTV NQYDLVWKIH 720
  721 DSFSKLIQLK NLPQREIPHA LRLSISLNCF LDSTTSTSGP VFQRDTVEAL RRLTEIWRTY 780
  781 QDWSPPTRGL KHLRDILSVL AMYDNPKNLI NDVRRT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle