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View Structure Prediction Details

Protein: YMR141C
Organism: Saccharomyces cerevisiae
Length: 102 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YMR141C.

Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRTDTSEKR KEDFIYVSLN IYLCVRLYIM HLISSNTPKS HCSVRFLCFF LSALAITSNR  60
   61 NFFRPEKMPT RIFCNDTLMV SPKTEKFLER FTNQKLAKLE VR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.799 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.709 a.26.1 4-helical cytokines
View Download 0.707 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.707 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.702 a.4.9 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
View Download 0.683 a.276.1 Description not found.
View Download 0.601 a.181.1 Antibiotic binding domain of TipA-like multidrug resistance regulators
View Download 0.600 a.7.6 Ribosomal protein S20
View Download 0.595 a.24.10 Histidine-containing phosphotransfer domain, HPT domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle