Protein: | GID8 |
Organism: | Saccharomyces cerevisiae |
Length: | 455 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GID8.
Description | E-value | Query Range |
Subject Range |
|
223.0 | [0..67] | [326..6] |
|
223.0 | [0..72] | [326..12] |
|
222.0 | [0..67] | [326..6] |
|
221.0 | [0..67] | [326..6] |
|
220.0 | [0..67] | [326..6] |
|
218.0 | [0..67] | [326..6] |
|
216.0 | [0..67] | [326..6] |
Region A: Residues: [1-350] |
1 11 21 31 41 51 | | | | | | 1 MTISTLSNET TKSGSCSGQG KNGGKDFTYG KKCFTKEEWK EQVAKYSAMG ELYANKTIHY 60 61 PLKIQPNSSG GSQDEGFATI QTTPIEPTLP RLLLNYFVSM AYEDSSIRMA KELGFIRNNK 120 121 DIAVFNDLYK IKERFHIKHL IKLGRINEAM EEINSIFGLE VLEETFNATG SYTGRTDRQQ 180 181 QQQQQQFDID GDLHFKLLLL NLIEMIRSHH QQENITKDSN DFILNLIQYS QNKLAIKASS 240 241 SVKKMQELEL AMTLLLFPLS DSADSGSIKL PKSLQNLYSI SLRSKIADLV NEKLLKFIHP 300 301 RIQFEISNNN SKFPDLLNSD KKIITQNFTV YNNNLVNGSN GTKITHISSD |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [351-455] |
1 11 21 31 41 51 | | | | | | 1 QPINEKMSSN EVTAAANSVW LNQRDGNVGT GSAATTFHNL ENKNYWNQTS ELLSSSNGKE 60 61 KGLEFNNYYS SEFPYEPRLT QIMKLWCWCE NQLHHNQIGV PRVEN |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.770 | a.35.1 | lambda repressor-like DNA-binding domains |
View | Download | 0.770 | a.35.1 | lambda repressor-like DNA-binding domains |
View | Download | 0.728 | a.29.8 | Description not found. |
View | Download | 0.691 | a.35.1 | lambda repressor-like DNA-binding domains |
View | Download | 0.691 | a.35.1 | lambda repressor-like DNA-binding domains |
View | Download | 0.626 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
View | Download | 0.617 | a.240.1 | Description not found. |
View | Download | 0.572 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
View | Download | 0.569 | a.77.1 | DEATH domain |