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View Structure Prediction Details

Protein: REC114
Organism: Saccharomyces cerevisiae
Length: 428 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for REC114.

Description E-value Query
Range
Subject
Range
RE114_SACPA - Meiotic recombination protein REC114 OS=Saccharomyces paradoxus GN=REC114 PE=2 SV=1
0.0 [1..428] [1..432]
gi|151945835 - gi|151945835|gb|EDN64067.1| protein involved in early stages of meiotic recombination [Saccharomyces...
RE114_YEAST - Meiotic recombination protein REC114 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REC...
REC114 - Protein involved in early stages of meiotic recombination; possibly involved in the coordination of ...
0.0 [1..428] [1..428]
RE114_SACPS - Meiotic recombination protein REC114 OS=Saccharomyces pastorianus GN=REC114 PE=2 SV=1
0.0 [1..428] [1..431]

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Predicted Domain #1
Region A:
Residues: [1-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYEYCSVVIK KYSKYTIPSF APNGFQSMLE PPQIDKWQHL SANCTLQFRV LLMDSRQILI  60
   61 NVVLNNSTLL ENIRLPLGDN QDLIQFSCKS PIISCKYISE EFGPRMLRRF QMNLPNDVEF 120
  121 NRTVVSLKNL NFVLRTARTS IAQSTITSQV QGNNNGTKVC FTEGPKVSSY TNPNTQFQTQ 180
  181 NMIMDFSQRY QEESERESNN RSNITLPHDS IQIAQQIWPN TDLNVVQSSQ DLNTPMATQT 240
  241 VLGRPESLIV QPLEVSQSPP NTTNCLPNAE NKKKKVDTTS DFTSRKEIAL CKTGLLETIH 300
  301 IPKERESQMQ SVTGLDATPT IIWSPGKDNT AKKNTSNKKN IDDKLTNPQK S

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 287.744727
Match: PF03525
Description: Meiotic recombination protein rec114

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [352-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNTHTPDRNK EVLPNGTLNE TRKEASPSEG LTIRVKNVNR NASRKISKRL IKEKLKDEEF  60
   61 MKWVNKVETV LNKMFEK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [268-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NAENKKKKVD TTSDFTSRKE IALCKTGLLE TIHIPKERES QMQSVTGLDA TPTIIWSPGK  60
   61 DNTAKKNTSN KKNIDDKLTN PQKSGNTHTP DRNKEVLPNG TLNETRKEAS PSEGLTIRVK 120
  121 NVNRNASRKI SKRLIKEKLK DEEFMKWVNK VETVLNKMFE K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle