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View Structure Prediction Details

Protein: DLT1
Organism: Saccharomyces cerevisiae
Length: 342 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DLT1.

Description E-value Query
Range
Subject
Range
DLT1_YEAST - Defect at low temperature protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLT1...
DLT1_YEAS8 - Defect at low temperature protein 1 OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mou...
DLT1_YEAS1 - Defect at low temperature protein 1 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=DLT1 PE=3 SV=1
DLT1 - Protein of unknown function, mutant sensitive to 6-azauracil (6AU) and mycophenolic acid (MPA)
0.0 [1..342] [1..342]
gi|18376015 - gi|18376015|emb|CAB91749.2| conserved hypothetical protein [Neurospora crassa]
9.0E-44 [2..108] [3..107]

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Predicted Domain #1
Region A:
Residues: [1-117]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGFAKLKSW LYKASLFVSL ILLIGFSVVL PIDSIAQASK SENNAFNTFI VVGALVVFGV  60
   61 FCIFIIIGRM LFHKSCLKDI PRRYIPITPA DLPHRSSREA VLQNMERSKE LTILLKK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.922 N/A N/A a.47.2 t-snare proteins
View Download 0.760 N/A N/A a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.748 N/A N/A a.47.2 t-snare proteins
View Download 0.618 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.602 N/A N/A a.2.1 GreA transcript cleavage protein, N-terminal domain

Predicted Domain #2
Region A:
Residues: [118-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKDPVIHDGL EPPRRCDYPL DEKLFPEYLN YADCIKSLTD RLKYHGLFLN NLDVRMNLED  60
   61 TFADVVNSQF VNHNANKIQL EKAKEFIDLY ETIRFSGKDV TRDQFIKFVK FCLYFGEVSL 120
  121 TRDTSFANLH NFRLNGSSNN IGRTESKYSI NPFDENEYAQ DDMHYFPEPP THLVRESSIS 180
  181 TVARHVSSGV DLTNSEEHPL DTDSDCNALR LKLSKADSYR SVIRH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle