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View Structure Prediction Details

Protein: YMR122W-A
Organism: Saccharomyces cerevisiae
Length: 84 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YMR122W-A.

Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSTSTSAS ASSSIKTNSA LVSNNVVAAS SVSATSTASS SAAKNTTSSS KNAAPGMVAN  60
   61 PVSSKYGIIM AAFAAVSFVL GTGI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.489 a.3.1 Cytochrome c
View Download 0.469 a.3.1 Cytochrome c
View Download 0.381 a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.381 a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.291 a.8.8 Description not found.
View Download 0.279 a.130.1 Chorismate mutase II
View Download 0.254 d.50.1 dsRNA-binding domain-like
View Download 0.243 a.4.9 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
View Download 0.204 a.2.6 Effector domain of the protein kinase pkn/prk1


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle