| Protein: | SPG4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 115 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPG4.
| Description | E-value | Query Range |
Subject Range |
|
|
86.0 | [0..2] | [114..3] |
|
|
71.0 | [0..1] | [114..1] |
|
Region A: Residues: [1-115] |
1 11 21 31 41 51
| | | | | |
1 MGSFWDAFAV YDKKKHADPS VYGGNHNNTG DSKTQVMFSK EYRQPRTHQQ ENLQSMRRSS 60
61 IGSQDSSDVE DVKEGRLPAE VEIPKNVDIS NMSQGEFLRL YESLRRGEPD NKVNR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.530 | c.54.1 | IIA domain of mannose transporter, IIA-Man |
| View | Download | 0.278 | a.79.1 | Antitermination factor NusB |
| View | Download | 0.232 | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
| View | Download | 0.222 | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
| View | Download | 0.202 | a.156.1 | S13-like H2TH domain |
