| Protein: | YPK2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 677 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPK2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..677] | [1..677] |
|
|
0.0 | [1..677] | [1..677] |
|
|
0.0 | [193..666] | [180..668] |
|
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0.0 | [193..666] | [180..668] |
|
|
0.0 | [43..663] | [13..617] |
|
|
0.0 | [193..666] | [180..668] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MHSWRISKFK LGRSKEDDGS SEDENEKSWG NGLFHFHHGE KHHDGSPKNH NHEHEHHIRK 60
61 INTNETLPSS LSSPKLRNDA SFKNPSGIGN DNSKASERKA SQSSTETQGP SSESGLMTVK 120
121 VYSGKDFTLP FPITSNSTIL QKLLSSGILT S
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [152-280] |
1 11 21 31 41 51
| | | | | |
1 SSNDASEVAA IMRQLPRYKR VDQDSAGEGL IDRAFATKFI PSSILLPGST NSSPLLYFTI 60
61 EFDNSITTIS PDMGTMEQPV FNKISTFDVT RKLRFLKIDV FARIPSLLLP SKNWQQEIGE 120
121 QDEVLKEIL
|
| Detection Method: | |
| Confidence: | 12.522879 |
| Match: | 1jnuA_ |
| Description: | Photoreceptor phy3 flavin-binding domain, lov2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [281-335] |
1 11 21 31 41 51
| | | | | |
1 KKINTNQDIH LDSFHLPLNL KIDSAAQIRL YNHHWISLER GYGKLNITVD YKPSK
|
|
Region B: Residues: [387-407] |
1 11 21 31 41 51
| | | | | |
1 THTLAERTVL ARVDCPFIVP L
|
|
Region C: Residues: [423-624] |
1 11 21 31 41 51
| | | | | |
1 FINGGELFYH LQHEGRFSLA RSRFYIAELL CALDSLHKLD VIYRDLKPEN ILLDYQGHIA 60
61 LCDFGLCKLN MKDNDKTDTF CGTPEYLAPE ILLGQGYTKT VDWWTLGILL YEMMTGLPPY 120
121 YDENVPVMYK KILQQPLLFP DGFDPAAKDL LIGLLSRDPS RRLGVNGTDE IRNHPFFKDI 180
181 SWKKLLLKGY IPPYKPIVKS EI
|
| Detection Method: | |
| Confidence: | 856.9794 |
| Match: | 1atpE_ |
| Description: | cAMP-dependent PK, catalytic subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [336-386] |
1 11 21 31 41 51
| | | | | |
1 NKPLSIDDFD LLKVIGKGSF GKVMQVRKKD TQKIYALKAL RKAYIVSKCE V
|
|
Region B: Residues: [408-422] |
1 11 21 31 41 51
| | | | | |
1 KFSFQSPEKL YLVLA
|
|
Region C: Residues: [625-677] |
1 11 21 31 41 51
| | | | | |
1 DTANFDQEFT KEKPIDSVVD EYLSASIQKQ FGGWTYIGDE QLGDSPSQGR SIS
|
| Detection Method: | |
| Confidence: | 856.9794 |
| Match: | 1atpE_ |
| Description: | cAMP-dependent PK, catalytic subunit |
| Matching Structure (courtesy of the PDB): |
|
