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View Structure Prediction Details

Protein: YMR099C
Organism: Saccharomyces cerevisiae
Length: 297 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMR099C.

Description E-value Query
Range
Subject
Range
AAPC_PENCL - (Q40784) Putative apospory-associated protein C
AAPC_CENCI - Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1
2.0E-90 [3..297] [29..320]
gi|38346398, gi|... - gi|50929321|ref|XP_474188.1| OSJNBa0011F23.4 [Oryza sativa (japonica cultivar-group)], gi|38346398|e...
4.0E-87 [5..297] [37..326]
YMY9_YEAST - Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR099C ...
gi|207342341 - gi|207342341|gb|EDZ70132.1| YMR099Cp-like protein [Saccharomyces cerevisiae AWRI1631]
YMR099C - Glucose-6-phosphate 1-epimerase (hexose-6-phosphate mutarotase), likely involved in carbohydrate met...
gi|190408328 - gi|190408328|gb|EDV11593.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
6.0E-87 [1..297] [1..297]
gi|8777366, gi|2... - gi|8777366|dbj|BAA96956.1| apospory-associated protein C [Arabidopsis thaliana], gi|28059286|gb|AAO3...
6.0E-86 [5..297] [15..304]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
3.0E-82 [4..297] [83..370]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIKETDKEV VLTHPADETT SVHILKYGAT VYSWKLKSEE QLWLSTAAKL DGSKPVRGGI  60
   61 PLVFPVFGKN STDEHLSKLP QHGLARNSTW EFLGQTKENP PTVQFGLKPE IANPELTKLW 120
  121 PMDYLLILTV ELGSDYLKTA IEVENTSSSK ELKFNWLFHT YFRIEDIEGT MVSNLAGMKL 180
  181 YDQLLKESYV DKHPVVTFN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.0
Match: 1l7jA_
Description: Galactose mutarotase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [200-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QETDVIYQNV SAERAIQIVD KGVQIHTLKR YNLPDTVVWN PWIEKSQGMA DFEPKTGYQQ  60
   61 MICIEPGHVH DFISLAPGKK WNAYQLLCKE ELKYQAIQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.494 b.55.1 PH domain-like
View Download 0.601 c.47.1 Thioredoxin-like
View Download 0.472 b.61.3 D-aminopeptidase, middle and C-terminal domains
View Download 0.460 d.110.1 Profilin (actin-binding protein)
View Download 0.453 d.14.1 Ribosomal protein S5 domain 2-like
View Download 0.441 b.71.1 Glycosyl hydrolase domain
View Download 0.440 b.55.1 PH domain-like
View Download 0.424 d.16.1 FAD-linked reductases, C-terminal domain
View Download 0.404 d.94.2 Putative transcriptional regulator TM1602, C-terminal domain
View Download 0.391 d.34.1 DNA-binding domain of Mlu1-box binding protein MBP1
View Download 0.391 b.89.1 Cyanovirin-N
View Download 0.378 b.40.4 Nucleic acid-binding proteins
View Download 0.368 b.71.1 Glycosyl hydrolase domain
View Download 0.367 d.94.2 Putative transcriptional regulator TM1602, C-terminal domain
View Download 0.367 b.40.2 Bacterial enterotoxins
View Download 0.366 b.55.1 PH domain-like
View Download 0.364 a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.364 b.71.1 Glycosyl hydrolase domain
View Download 0.361 b.89.1 Cyanovirin-N
View Download 0.360 b.55.1 PH domain-like
View Download 0.354 b.61.3 D-aminopeptidase, middle and C-terminal domains
View Download 0.347 b.55.1 PH domain-like
View Download 0.342 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.339 b.33.1 ISP domain
View Download 0.337 c.55.5 MTH1175-like
View Download 0.336 d.87.1 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
View Download 0.335 a.133.1 Phospholipase A2, PLA2
View Download 0.333 d.94.2 Putative transcriptional regulator TM1602, C-terminal domain
View Download 0.331 d.233.1 Inhibitor of vertebrate lysozyme, Ivy
View Download 0.324 b.55.1 PH domain-like
View Download 0.320 b.61.1 Avidin/streptavidin
View Download 0.316 b.61.1 Avidin/streptavidin
View Download 0.306 b.71.1 Glycosyl hydrolase domain
View Download 0.300 b.55.1 PH domain-like
View Download 0.300 a.1.1 Globin-like
View Download 0.289 a.29.2 Bromodomain
View Download 0.285 d.14.1 Ribosomal protein S5 domain 2-like
View Download 0.270 b.59.1 XRCC4, N-terminal domain
View Download 0.258 a.4.2 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
View Download 0.258 b.71.1 Glycosyl hydrolase domain
View Download 0.254 d.109.1 Actin depolymerizing proteins
View Download 0.248 b.24.1 Hyaluronate lyase-like, C-terminal domain
View Download 0.242 d.110.1 Profilin (actin-binding protein)
View Download 0.241 b.24.1 Hyaluronate lyase-like, C-terminal domain
View Download 0.239 b.19.1 Viral protein domain
View Download 0.238 d.110.1 Profilin (actin-binding protein)
View Download 0.235 d.19.1 MHC antigen-recognition domain
View Download 0.229 a.60.10 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
View Download 0.225 d.54.1 Enolase N-terminal domain-like
View Download 0.220 a.4.2 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
View Download 0.219 a.3.1 Cytochrome c
View Download 0.216 b.61.1 Avidin/streptavidin
View Download 0.214 d.88.1 SRF-like
View Download 0.204 d.58.1 4Fe-4S ferredoxins
View Download 0.202 c.55.7 Methylated DNA-protein cysteine methyltransferase domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle