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View Structure Prediction Details

Protein: UTP15
Organism: Saccharomyces cerevisiae
Length: 513 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UTP15.

Description E-value Query
Range
Subject
Range
YY46_NOSS1 - Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=...
gi|25530855 - pir||AC2239 WD-40 repeat protein [imported] - Nostoc sp. (strain PCC 7120)
0.0 [3..475] [1035..1488]
gi|17225210 - gi|17225210|gb|AAL37301.1|AF323585_1 beta transducin-like protein HET-D2Y [Podospora anserina]
0.0 [2..478] [833..1300]

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Predicted Domain #1
Region A:
Residues: [1-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTARPRIIT SKAPLLPQQT TPEQRYWRQY TSAQLVKEHN SVTHISFNPQ HPHDFAVTSS  60
   61 TRVQIFSSRT RQVIKTFSRF KDVVYSASFR SDGKLLCAGD ATGLVSVYDS YNPRTILLSI 120
  121 NASTHPTHVT KFHTQDNKIL ATASDDRVTR LWDISNAYEP QLELTGATDY VRTLSFIPAA 180
  181 PHLVATGSYD GLIRLYDTRS SGSTPIYSLN HDQPVENVIA VSPTQIVSCG GNNFKVWDLT 240
  241 SNKKLYERGN FNKAVTCLDY VENFDSPMQS ALIASSLDGH VKVFDPLDNF QVKFGWKFSG 300
  301 PVLSCAVSPS TAQGNRHLVA GLSSGLLAIR TKKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 111.751666
Match: 1gg2B_
Description: beta1-subunit of the signal-transducing G protein heterotrimer
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [335-513]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKRSSDKENA PASFNKNAKS NNFQRMMRGS EYQGDQEHII HNDKVRSQRR MRAFERNINQ  60
   61 FKWSEALDNA FVPGMAKELT LTVLQELRKR GKVRVALYGR DESTLEPLLN WCLKGIEDVR 120
  121 SASIVADWVA VVLELYGNTL ESSPVLQELM IDLKTKVRHE IHKSKEAQRI EGMLQLLTS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [419-513]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QELRKRGKVR VALYGRDEST LEPLLNWCLK GIEDVRSASI VADWVAVVLE LYGNTLESSP  60
   61 VLQELMIDLK TKVRHEIHKS KEAQRIEGML QLLTS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 24.366532
Match: PF09384.1
Description: No description for PF09384.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle