| Protein: | NPL6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 435 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NPL6.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..435] | [1..435] |
|
|
0.0 | [81..410] | [37..362] |
|
Region A: Residues: [1-261] |
1 11 21 31 41 51
| | | | | |
1 MSDSEGGLAS EVEHEKRSRS TSNRPNYAID TEDLDIDEND ENEDDDYREE EANEGVNEEE 60
61 ISDEEEQINK SGRNKRRHVD EEEDLSEDKG VTRSRNRSKF KKPVFPGIDD AEENLNPLKV 120
121 VNEEYVLPDD PEGETKITAD GDLLGGREFL VRTFTLTEKG NRKFMLATEP ARIVGFRDSY 180
181 LFFQTHPNLY KFILNQTQKN DLIDRGVLPY SYRNRQIALV TARGVFKEFG AKIIRGGKHI 240
241 TDDYYASELR TKGNVIEGKL A
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [262-435] |
1 11 21 31 41 51
| | | | | |
1 GDPIDKSARA LETMMYPASE NGINPAKNQV EFFEHRPHGH MSNSNIIASG SKLSSTNWLY 60
61 QHSAACSRFN SDLFYDRVKV LLVDQQGLRD AYTNILHIPE STQSTTVLGW RRSKNDSPSD 120
121 TSIVYETVIH DNDLNKPKTG LSEIPKEIYE DVVDEDVLRA ITEQQNFEKC NEYI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [268-435] |
1 11 21 31 41 51
| | | | | |
1 SARALETMMY PASENGINPA KNQVEFFEHR PHGHMSNSNI IASGSKLSST NWLYQHSAAC 60
61 SRFNSDLFYD RVKVLLVDQQ GLRDAYTNIL HIPESTQSTT VLGWRRSKND SPSDTSIVYE 120
121 TVIHDNDLNK PKTGLSEIPK EIYEDVVDED VLRAITEQQN FEKCNEYI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
