Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMR086W.
Description | E-value | Query Range |
Subject Range |
|
290.0 | [0..1] | [960..1] |
|
279.0 | [0..5] | [884..758] |
|
255.0 | [0..421] | [948..989] |
|
253.0 | [0..421] | [948..989] |
|
231.0 | [0..344] | [947..965] |
|
228.0 | [0..320] | [947..983] |
Region A: Residues: [1-70] |
1 11 21 31 41 51 | | | | | | 1 MFRRRTTAPE MEQADPTAVA AAASIGKLLM KKGNQSDNEQ RPTYRSASMT NLRKPSAPKR 60 61 MSSISSISSE |
Region A: Residues: [71-416] |
1 11 21 31 41 51 | | | | | | 1 SRRSDGKGRP GKINSLTQRS SMGKGDSLNS PLTKEPQHKT RSHNRTSSLP NQRGQQSRNS 60 61 SGLQRQKSKT HQRISYDEAQ RTFKDFGGPQ ARGILTGQHR TENPSGSIPL RTTRKYIPGP 120 121 NGLVAIEVPV EKPSNANTSK LLRRSNSAHS ALNARNGSLL RKKVSQESLH SQPKKTSSLG 180 181 NTSSTQAKKG QKAVQERNLA KKHPINSNVP LIETQVREET DQELKLDNSN SSESETVVNS 240 241 ENNLEKPSSL NIEKDDLSKL IHENIELESF IEEKGKEKPL NSDQEDVFIS EKTVKGDVQW 300 301 PKNNRQASTL EKTFNYDNEE KREGNKPVAE HPLPEAEVDD KSVEQL |
Region A: Residues: [417-474] |
1 11 21 31 41 51 | | | | | | 1 NNISSSGSYS AQGSVENSKP ENGNKNLEND TTSSPTQDLD EKSRSIEEKD TLEGTESS |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.411 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
View | Download | 0.411 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
View | Download | 0.388 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
View | Download | 0.388 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
View | Download | 0.365 | a.4.15 | Description not found. |
View | Download | 0.336 | a.4.1 | Homeodomain-like |
View | Download | 0.309 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
Region A: Residues: [475-751] |
1 11 21 31 41 51 | | | | | | 1 KKVEKPDNCC EKISGANTSS KKGNVGDTKD EFFDTVEESD QKTSKSNSSK NTDHSNQTEP 60 61 TPSLAQYLRT SNTYLSRKNQ SKQAEQEKFH KPEAPMVPVT KVVTPIKSAL KKSSGSSNHD 120 121 SSMYSDNSPA NGAYLSLTTA ENTRLNAQMT MSDSVSRRAS LKRSSIKRPQ SVGQFRSIRS 180 181 NSPSPPEKIN NKRHSAIPLG TPEKGKPKRN SVMASLSKNS QQIQEPASVY ESNGPNKPKN 240 241 QINKNIKRGS QIAQNNKPST KDMNSILYPK EPPPRKS |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [752-960] |
1 11 21 31 41 51 | | | | | | 1 SFEKTRSNES HLGFKKLSLR NGNFEEALSE SYNGQASQNS TNVNRTDTAQ EFFKYLGHSS 60 61 RFADSDSEDE SQFFNQGPSK YNTETEGNKT SGNKNSNGGN GAFSLFKSKS KQKENNVVSP 120 121 GVSSPNHTTT DPAITSKKVD KKFSGLSLRA ASEAEPAKNS NPSMTNRLRF SSNPENGESR 180 181 LPQAQEVSVT KEKKGSFGKK LKKIFGRKK |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.