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View Structure Prediction Details

Protein: YMR086C-A
Organism: Saccharomyces cerevisiae
Length: 112 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YMR086C-A.

Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLFCYCLLL GTRIGTRIGT RIFIVHPIIS PLIAVETAKK KKHIKWRFLD YSLLKNPLYV  60
   61 TVHGSHRSEV ERARKRIKYI TCTRREFLPR VPISFYQRFF SVFCRNYPSF LL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.768 d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.768 d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.623 a.46.1 Methionine synthase domain
View Download 0.594 a.40.1 Calponin-homology domain, CH-domain
View Download 0.591 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.559 a.1.1 Globin-like
View Download 0.537 a.46.1 Methionine synthase domain
View Download 0.525 a.1.1 Globin-like
View Download 0.508 a.1.1 Globin-like
View Download 0.501 a.1.1 Globin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle