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View Structure Prediction Details

Protein: SEN15
Organism: Saccharomyces cerevisiae
Length: 148 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEN15.

Description E-value Query
Range
Subject
Range
SEN15 - Subunit of the tRNA splicing endonuclease, which is composed of Sen2p, Sen15p, Sen34p, and Sen54p
gi|151946217 - gi|151946217|gb|EDN64448.1| tRNA splicing endonuclease subunit [Saccharomyces cerevisiae YJM789]
3.0E-83 [1..148] [1..148]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDIINCRRE ITSRRLRKIR MATTDIISLV KNNLLYFQMW TEVEILQDDL SWKGNSLRLL  60
   61 RGRPPHKLSN DVDTEHENSL SSPRPLEFIL PINMSQYKEN FLTLECLSQT FTHLCSPSTE 120
  121 RILLAIINDD GTIVYYFVYK GVRKPKRN

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
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Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle