YRC Public Data Repository - Protein Structure Prediction

Protein:	FET3
Organism:	Saccharomyces cerevisiae
Length:	636 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FET3.

Description	E-value	Query Range	Subject Range
FET3_YEAST - Iron transport multicopper oxidase FET3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=... FET3 - Ferro-O2-oxidoreductase required for high-affinity iron uptake and involved in mediating resistance ...	0.0	[1..636]	[1..636]
FET3_CANGA - Iron transport multicopper oxidase FET3 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 /... FET3_CANGA - Iron transport multicopper oxidase FET3 OS=Candida glabrata GN=FET3 PE=3 SV=1	0.0	[9..608]	[5..608]
FET3_CANAX - Iron transport multicopper oxidase FET3 OS=Candida albicans GN=FET3 PE=3 SV=1	0.0	[1..600]	[1..596]
gi\|13171071 - gi\|13171071\|emb\|CAC33177.1\| Fet3 protein [Pichia pastoris]	0.0	[22..625]	[1..602]
gi\|7798835 - gi\|7798835\|emb\|CAB90817.1\| ferro-O2-oxidoreductase [Arxula adeninivorans]	0.0	[7..602]	[3..595]
FIO1_SCHPO - Iron transport multicopper oxidase fio1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fi... fio1 - iron transport multicopper oxidase Fio1	0.0	[1..615]	[1..594]
gi\|85075871 - gi\|85075871\|ref\|XP_955835.1\| hypothetical protein NCU03498 [Neurospora crassa OR74A] gi\|32404286, gi\|... - gi\|32404286\|ref\|XP_322756.1\| hypothetical protein [Neurospora crassa], gi\|28916856\|gb\|EAA26599.1\| hy...	0.0	[3..585]	[1..601]
gi\|16041065 - gi\|16041065\|dbj\|BAB69775.1\| laccase [Pycnoporus coccineus]	0.0	[1..531]	[1..517]
LAC1_PYCCI - Laccase OS=Pycnoporus cinnabarinus GN=LCC3-1 PE=1 SV=1	0.0	[1..531]	[1..517]

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Predicted Domain #1

Region A:
Residues: [1-320]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNALLSIAV LLFSMLSLAQ AETHTFNWTT GWDYRNVDGL KSRPVITCNG QFPWPDITVN  60
   61 KGDRVQIYLT NGMNNTNTSM HFHGLFQNGT ASMDGVPFLT QCPIAPGSTM LYNFTVDYNV 120
  121 GTYWYHSHTD GQYEDGMKGL FIIKDDSFPY DYDEELSLSL SEWYHDLVTD LTKSFMSVYN 180
  181 PTGAEPIPQN LIVNNTMNLT WEVQPDTTYL LRIVNVGGFV SQYFWIEDHE MTVVEIDGIT 240
  241 TEKNVTDMLY ITVAQRYTVL VHTKNDTDKN FAIMQKFDDT MLDVIPSDLQ LNATSYMVYN 300
  301 KTAALPTQNY VDSIDNFLDD

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [514-545]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SENHLEVCQS CSVATEGNAA ANTLDLTDLT GE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	627.228787
Match:	1kyaA_
Description:	Laccase
Matching Structure (courtesy of the PDB):

Predicted Domain #2

Region A:
Residues: [321-513]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FYLQPYEKEA IYGEPDHVIT VDVVMDNLKN GVNYAFFNNI TYTAPKVPTL MTVLSSGDQA  60
   61 NNSEIYGSNT HTFILEKDEI VEIVLNNQDT GTHPFHLHGH AFQTIQRDRT YDDALGEVPH 120
  121 SFDPDNHPAF PEYPMRRDTL YVRPQSNFVI RFKADNPGVW FFHCHIEWHL LQGLGLVLVE 180
  181 DPFGIQDAHS QQL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	627.228787
Match:	1kyaA_
Description:	Laccase
Matching Structure (courtesy of the PDB):

Predicted Domain #3

Region A:
Residues: [546-636]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVQHAFIPTG FTKKGIIAMT FSCFAGILGI ITIAIYGMMD MEDATEKVIR DLHVDPEVLL  60
   61 NEVDENEERQ VNEDRHSTEK HQFLTKAKRF F

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits