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View Structure Prediction Details

Protein: YMR057C
Organism: Saccharomyces cerevisiae
Length: 123 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YMR057C.

Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACLHTYIYI YIYIYNRTTC TRPWHTPSKD RLFECILHFL SQLARIRAPA NGCTFEDGPC  60
   61 LLGLPKSASP SSRRRVFIGD SAYCRDHPRR NGLIRTRKVK LISVGRRVSF FSRRRPFIGP 120
  121 ETV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.499 d.58.41 SEA domain
View Download 0.473 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.393 a.1.1 Globin-like
View Download 0.350 a.177.1 Sigma2 domain of RNA polymerase sigma factors
View Download 0.341 a.1.1 Globin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle