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View Structure Prediction Details

Protein: FAR3
Organism: Saccharomyces cerevisiae
Length: 204 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FAR3.

Description E-value Query
Range
Subject
Range
gi|1016024 - gi|1016024|gb|AAB39035.1| Far3p
gi|190408284 - gi|190408284|gb|EDV11549.1| factor arrest protein 3 [Saccharomyces cerevisiae RM11-1a]
6.0E-91 [1..204] [1..204]
gi|14245695 - gi|14245695|dbj|BAB56139.1| kinesin-like protein 2 [Giardia intestinalis]
0.007 [61..174] [329..448]

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Predicted Domain #1
Region A:
Residues: [1-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSGGSDSFD YLLQLTKALS AECRANRQET DRIELLLKRL AKQSGISYDN LSKNIIPDSW  60
   61 KDNASQKASP PTEAQKLISE NFKLIYEIEK QEYFNTKAVA LINNINEHFS YIKNFIDEQN 120
  121 AIRERNIATF SSEKLDERNK SLQQNYESLK TENEETKKKL HSIIKQFEKL LKEVDWDRIS 180
  181 KDSRDYSRFK KQLEYLQDTY QVLK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle