| Protein: | SUB1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 292 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUB1.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-49 | [3..292] | [4602..4887] |
|
|
1.0E-48 | [15..287] | [1226..1508] |
|
|
1.0E-47 | [15..287] | [1223..1507] |
|
|
1.0E-47 | [15..287] | [1223..1507] |
|
|
2.0E-46 | [16..287] | [1226..1508] |
|
|
5.0E-37 | [15..288] | [1228..1513] |
|
Region A: Residues: [1-116] |
1 11 21 31 41 51
| | | | | |
1 MSYYNRYRNK RRSDNGGGNL SNSNNNNGGM PSGLSASDAI FDLGKNKRVT VRQFRNINLI 60
61 DIREYYLDSS TGEMKPGKKG ISLTEDLYDE LLKHRLNIDE ALRRLGSKRP KTKMVR
|
| Detection Method: |  |
| Confidence: | 116.917458 |
| Match: | 1pcfA_ |
| Description: | Transcriptional coactivator PC4 C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [117-292] |
1 11 21 31 41 51
| | | | | |
1 LLSDDEYEDD NNNDSTNNDK DKNGKDKNSP KKRREDKSKA SNESHDLEPR SKKKKPAPPT 60
61 LLPHEENIQN AEREANATLI IPGQAGRKQQ EERKQKEKEE AEEAKAKAVA EQEKEAKAKE 120
121 KIAEPEPEPV PTLQAKKEDI VSNINESKDA NSSDEEFAQS LEAEMNKAED DISEEE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
