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View Structure Prediction Details

Protein: RSF1
Organism: Saccharomyces cerevisiae
Length: 376 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RSF1.

Description E-value Query
Range
Subject
Range
RSF1_YEAS7 - Respiration factor 1 OS=Saccharomyces cerevisiae (strain YJM789) GN=RSF1 PE=3 SV=1
RSF1_YEAST - Respiration factor 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSF1 PE=1 SV=1
RSF1 - Protein required for respiratory growth; localized to both the nucleus and mitochondrion; may intera...
0.0 [1..376] [1..376]

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Predicted Domain #1
Region A:
Residues: [1-376]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDLNPEMGK FATTKGPPQD NRGMVDIATL PNFPANRSGT PREEMYLAPN KMETPRILNM  60
   61 NMVPDYLQKE NFSPDFSSAT VSAKSSPVNV THDESLPLGT IESNSTKDSK YAVQRQQQQV 120
  121 VDFIENNMQL LSSETLNFRS DIMKTLELPI PKRRDIKGNH LSKLLFAKSP LTINTYCQFY 180
  181 DRRTKRICNQ EMIWKDKNSR EKHGSRKYQR HLSKVHDVQL TPNNFTEFFD HNSPLFQECY 240
  241 DYQSRLMRDL LVEPDAKFKE KKKKKKGDVN GNHPETGSSL INHQVQQQNV RELQSKIAMN 300
  301 DLIEILIDLN IPFSVLDYQP MRNWLIKYSI ISTDTLPDEV YFKTDPGVNE LEHNSSNLNN 360
  361 SNSGTPHNHN QNQHTN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle