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View Structure Prediction Details

Protein: YML083C
Organism: Saccharomyces cerevisiae
Length: 418 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YML083C.

Description E-value Query
Range
Subject
Range
YML083C - Putative protein of unknown function; strong increase in transcript abundance during anaerobic growt...
YMI3_YEAST - Putative uncharacterized protein YML083C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
0.0 [1..418] [1..418]

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Predicted Domain #1
Region A:
Residues: [1-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYLHVYNNN QAHVPRTPPG RQCLSPVLPP IILALDQQHS LTFGYSSPRC LPTPILPSMS  60
   61 TNTPVHWSQQ VVTIPVAVRN HAAMMPIITP MTSPRPQFEA TAPSPPLAPV AIKLPDLKLP 120
  121 PSPVPSTVED RVSHPILPKI VIGNGGGRDV ERDSTEELIR KIPNYIGCAK TKAQLSKVRS 180
  181 GKQLIACAQE YHHPVNKDEI ENINNILNFR DFIFKHPKSS FEFLCTLSFE QFVRVYSFIS 240
  241 FIYRTKKINK NKYELVCEMN VHEQLSNKRI QRTRTPEKYK IHLICESKLI LTFNHCTKTV 300
  301 KFESINGGHC HPISANHIIK PSLFLTHCIN KCYQTVSDPT DLKLALRDAL EALDHERIGL 360
  361 SFLKRRHFKC SHQASSLSNA SATLKKQEDH DTFGVHTGII HTANFFMFNA SSDIFQRN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle