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View Structure Prediction Details

Protein: YML053C
Organism: Saccharomyces cerevisiae
Length: 212 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YML053C.

Description E-value Query
Range
Subject
Range
YML053C - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
YMF3_YEAST - Uncharacterized protein YML053C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML053C ...
2.0E-80 [1..212] [1..212]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSYYEHNTA FQTNNCNSGS NAATTYNSDA NNDTIMNKRK NDHFEFDTHT FYQRSKRTKR  60
   61 DSVSTKFSVG SGCANLNNNN NNIIINNNNN NNNNNNNHNH NNSNNTATYN NIHYKKNIEI 120
  121 CPLKPVSMHH TMNSRLLNES EFYSETEEYM IHGYFGNTNR DITGTSPTGS ASIIQHQYHL 180
  181 LPSQSIIASQ APGTAMAALT NNNIANDYMD ID

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle