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View Structure Prediction Details

Protein: YML037C
Organism: Saccharomyces cerevisiae
Length: 340 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YML037C.

Description E-value Query
Range
Subject
Range
gi|207342502 - gi|207342502|gb|EDZ70251.1| YML037Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|151946125 - gi|151946125|gb|EDN64356.1| conserved protein [Saccharomyces cerevisiae YJM789]
YML037C - Putative protein of unknown function with some characteristics of a transcriptional activator; may b...
gi|190408204 - gi|190408204|gb|EDV11469.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
YMD7_YEAST - Uncharacterized protein YML037C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML037C ...
0.0 [1..340] [1..340]

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Predicted Domain #1
Region A:
Residues: [1-340]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDENKIIDQL FSKEYTPQDD SEQAKNGDVS LYGLLDEVAN GRRLMNCLFH SPMQMGNKLS  60
   61 TDKLDGKCRQ IQRDWIDEEK TITMNSGALQ LDGPVLFSWS HNVAPTSHQE TINTTFKQGS 120
  121 PSRGSNKPKI TTTSQLFDRA SAEIDKCIKP NSKSWMVEER FERNEAHTAD GKKPSTWANS 180
  181 DFKVDPLQKF VVKELPKEKK KSDGDKTKKN KSKRKSFFGF WGHSGSKSGS KKKSEKPIEA 240
  241 KNEIQDEVSQ KSGLSPDDDT TFSDKNTIQS KQESMSDQQA EPKVHEPAVT NTGCSEHDDG 300
  301 DGFEQVPAQS SYHPSSEPSI ASTPSLTLDS FIPLQPKKKI 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle