Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YML020W.
Description | E-value | Query Range |
Subject Range |
|
1414.0 | [0..1] | [664..1] |
|
651.0 | [0..112] | [664..18] |
|
609.0 | [0..24] | [664..28] |
|
602.0 | [0..115] | [664..143] |
|
394.0 | [0..294] | [661..352] |
|
384.0 | [0..280] | [661..442] |
|
353.0 | [0..293] | [661..551] |
|
276.0 | [0..288] | [664..488] |
|
275.0 | [0..3] | [645..221] |
Region A: Residues: [1-275] |
1 11 21 31 41 51 | | | | | | 1 MVTTPLHSSP KSSLKSSTTS LRSVHTQSGR MGPSEPKHRT TKSWSIWGGN DEEEPELSNK 60 61 NKGKETAQDN SQENDNVSNE GTRLHDNQQT TILKETTRIE KGEKDKKDRN AAIVEKNTRP 120 121 RAWPFFWGRN KKDPEPTHNI PTDADNNTLS RLANSLNPAP LTNTYIPYKP DAILIRDKGV 180 181 KTAKKLTDDI GNQFPNIVVP SFDILPKQTI WNTVTSTIWK WKTEYWDRRP SSRVREGEEQ 240 241 VQHSQNQLKE ETNTVANEAK DEERLEHNRG SLFRV |
Region A: Residues: [276-351] |
1 11 21 31 41 51 | | | | | | 1 DPWKKINLLS DYQSRPIRVL IVGVHGFFPT KIIRPFIGEP TGTSTKFVTE AEEIVKEYFD 60 61 QHKVPIEISK IALERE |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.935 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
View | Download | 0.935 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
View | Download | 0.834 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
View | Download | 0.834 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
View | Download | 0.771 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
View | Download | 0.740 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
View | Download | 0.740 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
View | Download | 0.722 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
View | Download | 0.722 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
View | Download | 0.666 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
Region A: Residues: [352-564] |
1 11 21 31 41 51 | | | | | | 1 GEIFDRVDFF YEVMKHWSKE INNSDFIYFV SHSQGCPVTI MLLAKLIKNG IINLDNSQFF 60 61 NDEIQFCSSK KIISVLAMAG INNGPFYGAD QTLFVRAYQT IEKDSLRELF EFQKFDSKQS 120 121 QSFIEGLRTI ISNNVKITFV GSINDQLVPL YSSTCLFANH PNIFRAIFID RGSQTPAFIT 180 181 RIVKIAGSLL NLGYNDHGII KEISGSLAGT LTG |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [565-664] |
1 11 21 31 41 51 | | | | | | 1 GGHSTIYNEK QVYHLGIKFA LETTDLSEMY PIEYSPYKLS ELGANPYRLP WCMRGLMYES 60 61 NKHFSNEEIK MLFKEFEEWE PETKQLKDIK NRLNGLKYRL |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.923 | a.118.8 | TPR-like |
View | Download | 0.861 | a.118.1 | ARM repeat |
View | Download | 0.777 | a.118.8 | TPR-like |
View | Download | 0.774 | a.118.8 | TPR-like |
View | Download | 0.774 | a.118.8 | TPR-like |
View | Download | 0.774 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.774 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.751 | a.118.11 | Cytochrome c oxidase subunit E |
View | Download | 0.739 | a.60.9 | lambda integrase-like, N-terminal domain |
View | Download | 0.698 | a.118.8 | TPR-like |