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View Structure Prediction Details

Protein: MRPL39
Organism: Saccharomyces cerevisiae
Length: 70 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRPL39.

Description E-value Query
Range
Subject
Range
gi|190408230 - gi|190408230|gb|EDV11495.1| mitochondrial 60S ribosomal protein L39 [Saccharomyces cerevisiae RM11-1...
gi|151946152 - gi|151946152|gb|EDN64383.1| YmL39 [Saccharomyces cerevisiae YJM789]
RM39_YEAST - 54S ribosomal protein L39, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
MRPL39 - Mitochondrial ribosomal protein of the large subunit
ORFP:17370 - YML009C, Contig c188 3495-3707
7.0E-21 [1..70] [1..70]

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Predicted Domain #1
Region A:
Residues: [1-70]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKVKSKNSV IKLLSTAASG YSRYISIKKG APLVTQVRYD PVVKRHVLFK EAKKRKVAER  60
   61 KPLDFLRTAK 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle