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View Structure Prediction Details

Protein: YLR445W
Organism: Saccharomyces cerevisiae
Length: 134 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLR445W.

Description E-value Query
Range
Subject
Range
YLR445W - Putative protein of unknown function; transcription is regulated by Ume6p and induced in response to...
GMC2_YEAST - Grand meiotic recombination cluster protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288...
241.0 [0..1] [128..1]
gi|49640885 - gi|49640885|emb|CAH02146.1| KLLA0B04928p [Kluyveromyces lactis]
gi|50303623, gi|... - gi|50303623|ref|XP_451753.1| unnamed protein product [Kluyveromyces lactis], gi|49640885|emb|CAH0214...
58.0 [0..11] [128..6]
gi|44983721 - gi|44983721|gb|AAS52820.1| AER137Wp [Ashbya gossypii ATCC 10895]
gi|44983721, gi|... - gi|45190742|ref|NP_984996.1| AER137Wp [Ashbya gossypii ATCC 10895], gi|44983721|gb|AAS52820.1| AER13...
56.0 [0..40] [125..23]
gi|50293931, gi|... - gi|50293931|ref|XP_449377.1| hypothetical protein CAGL0M00726g [Candida glabrata CBS138], gi|4952869...
49.0 [0..9] [131..4]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDTTEVPRQ SSENDQDNNL ERTNSLKSPD VTNNIPSLFK LAAEWQINNP QETFQNHILE  60
   61 NDVLKKINEI THLIRESYKD LSSQDGMMSK QQQEKMDWDL FCTVPVNIIE QYTKDMDEIY 120
  121 EKMERLAKVS IGRN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.636 f.14.1 Voltage-gated potassium channels
View Download 0.636 f.14.1 Voltage-gated potassium channels
View Download 0.581 d.19.1 MHC antigen-recognition domain
View Download 0.581 d.19.1 MHC antigen-recognition domain
View Download 0.546 a.118.11 Cytochrome c oxidase subunit E
View Download 0.546 a.118.11 Cytochrome c oxidase subunit E
View Download 0.522 a.22.1 Histone-fold
View Download 0.522 a.22.1 Histone-fold
View Download 0.484 a.18.1 T4 endonuclease V
View Download 0.484 a.18.1 T4 endonuclease V
View Download 0.415 a.7.8 GAT domain
View Download 0.368 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.362 a.24.3 Cytochromes
View Download 0.356 d.109.1 Actin depolymerizing proteins
View Download 0.344 a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.334 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.326 a.19.1 Fertilization protein
View Download 0.325 a.24.9 alpha-catenin/vinculin
View Download 0.317 a.151.1 Glutamyl tRNA-reductase dimerization domain
View Download 0.315 f.21.2 Fumarate reductase respiratory complex transmembrane subunits
View Download 0.307 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.303 a.26.1 4-helical cytokines
View Download 0.283 a.7.3 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
View Download 0.271 a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.270 a.2.3 Chaperone J-domain
View Download 0.264 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.250 a.24.4 Hemerythrin
View Download 0.244 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.236 a.7.7 BAG domain
View Download 0.223 a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.223 a.7.1 Spectrin repeat
View Download 0.219 a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.215 a.177.1 Sigma2 domain of RNA polymerase sigma factors
View Download 0.209 a.1.1 Globin-like
View Download 0.206 a.1.1 Globin-like
View Download 0.205 i.11.1 Computational models partly based on NMR data
View Download 0.200 a.25.1 Ferritin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle