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View Structure Prediction Details

Protein: ECM19
Organism: Saccharomyces cerevisiae
Length: 112 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ECM19.

Description E-value Query
Range
Subject
Range
gi|49643309 - gi|49643309|emb|CAG99261.1| KLLA0E05083p [Kluyveromyces lactis]
gi|49643309, gi|... - gi|50308345|ref|XP_454174.1| unnamed protein product [Kluyveromyces lactis], gi|49643309|emb|CAG9926...
85.0 [0..33] [85..4]
gi|50289289, gi|... - gi|50289289|ref|XP_447075.1| unnamed protein product [Candida glabrata], gi|49526384|emb|CAG60008.1|...
gi|49526384 - gi|49526384|emb|CAG60008.1| unnamed protein product [Candida glabrata]
84.0 [0..33] [101..3]
gi|45190660, gi|... - gi|45190660|ref|NP_984914.1| AER054Wp [Ashbya gossypii ATCC 10895], gi|44983639|gb|AAS52738.1| AER05...
gi|44983639 - gi|44983639|gb|AAS52738.1| AER054Wp [Ashbya gossypii ATCC 10895]
80.0 [0..33] [100..3]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWLKNTTIV VLFSHSTDKS NKHKKRQVQC NMRKNTLDMV TIGIACLVGV YTGTRFFEPI  60
   61 VIDRLRKDGN LRTDIPIPEY DEDGNLLKVT PSLSSTPAAP PTPPTPPTPP QQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.540 d.96.1 Tetrahydrobiopterin biosynthesis enzymes-like
View Download 0.529 a.1.1 Globin-like
View Download 0.520 a.26.1 4-helical cytokines
View Download 0.518 d.96.1 Tetrahydrobiopterin biosynthesis enzymes-like
View Download 0.518 d.96.1 Tetrahydrobiopterin biosynthesis enzymes-like
View Download 0.479 a.24.17 Group V grass pollen allergen
View Download 0.479 a.24.17 Group V grass pollen allergen
View Download 0.461 a.64.1 Saposin
View Download 0.446 a.26.1 4-helical cytokines
View Download 0.415 a.1.1 Globin-like
View Download 0.309 a.74.1 Cyclin-like
View Download 0.287 d.26.1 FKBP-like
View Download 0.260 a.228.1 Description not found.
View Download 0.255 a.45.1 Glutathione S-transferase (GST), C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle