| Protein: | NAM2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 894 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAM2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [10..892] | [1..871] |
|
|
0.0 | [10..893] | [1..871] |
|
|
0.0 | [1..894] | [1..894] |
|
|
0.0 | [1..894] | [1..894] |
|
|
0.0 | [10..893] | [1..868] |
|
|
0.0 | [23..894] | [6..857] |
|
|
0.0 | [10..894] | [1..860] |
|
|
0.0 | [10..893] | [48..906] |
|
|
0.0 | [10..894] | [1..860] |
|
|
0.0 | [10..892] | [37..892] |
|
Region A: Residues: [1-13] |
1 11 21 31 41 51
| | | | | |
1 MLSRPSSRFL STK
|
|
Region B: Residues: [707-739] |
1 11 21 31 41 51
| | | | | |
1 ILSLEKDLAI SKDYKTPTDL NDAEVKFHND FQR
|
|
Region C: Residues: [756-789] |
1 11 21 31 41 51
| | | | | |
1 TVISDYMKLT NILESALKKG EVRNEMIVQN LQKL
|
|
Region D: Residues: [823-894] |
1 11 21 31 41 51
| | | | | |
1 ERTTESKFKK FQIVVNGRVK FMYTADKNFL KLGRDAVIET LMNLPEGRMY LMNKKIKKFV 60
61 MKFNVISFLF HK
|
| Detection Method: |  |
| Confidence: | 290.228787 |
| Match: | 1ffyA_ |
| Description: | Isoleucyl-tRNA synthetase (IleRS) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [14-49] |
1 11 21 31 41 51
| | | | | |
1 RGPGPAVKKL IAIGEKWKQK TTRGLPKQDT LNSGSK
|
|
Region B: Residues: [61-89] |
1 11 21 31 41 51
| | | | | |
1 ALHIGHLRVY VISDSLNRFY KQKGYNVIH
|
|
Region C: Residues: [122-135] |
1 11 21 31 41 51
| | | | | |
1 MKQQMQSMLA NFDW
|
|
Region D: Residues: [597-706] |
1 11 21 31 41 51
| | | | | |
1 QGMVQGKTYV DPDSGKFLKP DELTFVNDSP DGNTVIIKSN GKVPVVSYEK MSKSKYNGAD 60
61 PNECILRHGP DATRAHILFQ SPIADALNWD ESKIVGIERW LQKVLHLTKN
|
|
Region E: Residues: [740-755] |
1 11 21 31 41 51
| | | | | |
1 FLKSITESFE VNLSLN
|
|
Region F: Residues: [790-822] |
1 11 21 31 41 51
| | | | | |
1 VTVIYPAVPS ISEEAAEMIN SQMEWNQYRW PEV
|
| Detection Method: | |
| Confidence: | 290.228787 |
| Match: | 1ffyA_ |
| Description: | Isoleucyl-tRNA synthetase (IleRS) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [50-60] |
1 11 21 31 41 51
| | | | | |
1 YILCQFPYPS G
|
|
Region B: Residues: [90-121] |
1 11 21 31 41 51
| | | | | |
1 PMGWDAFGLP AENAAIERSI NPAIWTRDNI AK
|
|
Region C: Residues: [136-167] |
1 11 21 31 41 51
| | | | | |
1 DREITTCDPE YYKFTQWIFL KLFENGLAYR KE
|
|
Region D: Residues: [411-596] |
1 11 21 31 41 51
| | | | | |
1 EHSGVLTVVA RKSIMGMLNS EGLSKSVVRY KIRDWLISRQ RYWGTPIPII HCDNCGPVPV 60
61 PESDLPVKLP ELEGLDTKGN PLSTIDEFVN VACPSCGSPA KRETDTMDTF IDSSWYYFRF 120
121 LDPKNTSKPF DREIASKNMP VDIYIGGVEH AILHLLYSRF IAKFLGSINA WSDPAGIFEP 180
181 FKKLVT
|
| Detection Method: | |
| Confidence: | 290.228787 |
| Match: | 1ffyA_ |
| Description: | Isoleucyl-tRNA synthetase (IleRS) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [168-410] |
1 11 21 31 41 51
| | | | | |
1 AEINWDPVDM TVLANEQVDA QGRSWRSGAI VEKKQLKQWF LGITKFAPKL KKHLNQLKDW 60
61 PSNVKQMQKN WIGESVGAEL VFKVADPKFE NLIVFTTRPE TLFAVQYVAL ALDHPIVQKY 120
121 CEEMPDLKEF IQKSDQLPND TKEGFQLPNI KAVNPLTKEE VPIFAAPYVV SSYGSAPSAV 180
181 MGCPGHDNRD FEFWQTNCPG EHIKTCIAPF FDDASKVTEQ ERQRIIDTVP FTSTDGVLTK 240
241 ECG
|
| Detection Method: | |
| Confidence: | 290.228787 |
| Match: | 1ffyA_ |
| Description: | Isoleucyl-tRNA synthetase (IleRS) |
| Matching Structure (courtesy of the PDB): |
|
