YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YLR346C
Organism: Saccharomyces cerevisiae
Length: 101 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for YLR346C.

Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSISNCPIG LVSKNTINSA STIAEWVACP WKYINVVGSG RYVSNKPDKI TRYDLLKAAQ  60
   61 EAEMQELLTR NDMKGRHKRN KKSKIALETI AEENSSTESL F

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.636 a.90.1 Transcription factor STAT-4 N-domain
View Download 0.472 d.58.7 RNA-binding domain, RBD
View Download 0.448 d.6.1 Prion-like
View Download 0.443 a.118.1 ARM repeat
View Download 0.443 a.118.1 ARM repeat
View Download 0.418 a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.377 a.7.8 GAT domain
View Download 0.358 a.2.3 Chaperone J-domain
View Download 0.355 a.29.4 RecG, N-terminal domain
View Download 0.341 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.323 a.7.8 GAT domain
View Download 0.280 a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.278 d.58.3 Protease propeptides/inhibitors
View Download 0.271 a.16.1 S15/NS1 RNA-binding domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle