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View Structure Prediction Details

Protein: YLR334C
Organism: Saccharomyces cerevisiae
Length: 126 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLR334C.

Description E-value Query
Range
Subject
Range
gi|30038207 - gi|30038207|gb|AAP06934.1| Yol013-ap [Saccharomyces cerevisiae]
102.0 [0..5] [91..6]

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Predicted Domain #1
Region A:
Residues: [1-126]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNLIIAGIL LLIKAMIFCI VNILEVLLED IGILKSLFLH NAITIISSSV LYFLLSYYII  60
   61 NPRISASIIF DDCFSIFMLS SYTVCDDILI TRILNKQMML QFHPIRTIIK LLQHFPVKSS 120
  121 PNAHTA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.875 a.24.16 Nucleotidyltransferase substrate binding subunit/domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle