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View Structure Prediction Details

Protein: YLR312C
Organism: Saccharomyces cerevisiae
Length: 398 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLR312C.

Description E-value Query
Range
Subject
Range
YLR312C - Putative protein of unknown function
ATG39_YEAST - Autophagy-related protein 39 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATG39 PE=1 ...
0.0 [1..398] [1..398]

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Predicted Domain #1
Region A:
Residues: [1-398]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEEDDHWNL VRLRRLRKGR EGEEQSSKSE ISLDSLHESS FAGEDDEDFD ADVLSNTSSE  60
   61 ESAQMNRIYD FRTSNEFSNA GVNIDQTGVP TISESFDTLS GSNVGGTVLP SMEGSKLKDS 120
  121 TIRNSSTLSD HIIDKSEGKS AKLKMWHVIM LSSLLSMTFS YLALEYSLTG DVLAGFKSQQ 180
  181 SLRNNERKLL YGNIDFVDKK SYDSSSDSLS QWAPSGKYYV DFDNHIAYPL KDDDLMGWRR 240
  241 YKTDLVILWY TTKARMKDGW HKRINKINGG RIKLHLFLKN SFKSAQESLR VLHKEQKRRW 300
  301 KRLFVLLHNK YRQFSPHIKR YFDHSCQKAK QCWSGSRLQL RKLRFKSMKP FRVFQFKVRK 360
  361 DTNWFVKQLK RFGLKLQHSR MYKAMSECRK KNYFKCKH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle