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View Structure Prediction Details

Protein: YLR287C
Organism: Saccharomyces cerevisiae
Length: 355 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLR287C.

Description E-value Query
Range
Subject
Range
YL287_YEAST - Uncharacterized protein YLR287C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR287C ...
YLR287C - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
0.0 [1..355] [1..355]
YDBI_SCHPO - Uncharacterized protein C22E12.18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E1...
SPAC22E12.18 - conserved fungal protein
0.0 [7..349] [8..332]

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Predicted Domain #1
Region A:
Residues: [1-60]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTGSSDRKD DVKLLELLNS IDEQFLVPYK KPEDLRKISS TTKLQGSTPT KELDKLASVL  60
   61 

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [139-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RLKNDENASL DKERLTSVGK IFNACDSLSN CSKAGPYG

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 8.2
Match: 1dofA
Description: Adenylosuccinate lyase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [61-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAHCTKIGIV CKPGTFDNNH KVVITEIQNF SRPLFYLLSL FPLFYNNKDC PKYFTDQLDE  60
   61 STLQLLDGLR DFIAELQE

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [177-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ILANILKDNV AIMDDTMNEI KEWLEEPDFS ANSDDIFLDF EDSESESDSQ KEEFDQEKVY  60
   61 ENIKLFFDGF TRKIKLIKLL VSTFRKTLVS KDFTPKRNQA ETLDSIHTYL KEIQLLLDEV 120
  121 VSTVQFEPKN FTNEEVKEEQ AALVAVTKKV LIQMSKLYEG DPKRKKWIDT WEIKFNELF

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 8.2
Match: 1dofA
Description: Adenylosuccinate lyase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle