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View Structure Prediction Details

Protein: YLR173W
Organism: Saccharomyces cerevisiae
Length: 608 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLR173W.

Description E-value Query
Range
Subject
Range
YL173_YEAST - Putative uncharacterized protein YLR173W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
YLR173W - Putative protein of unknown function
0.0 [1..608] [1..608]

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Predicted Domain #1
Region A:
Residues: [1-608]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTNSPLRAD NQDLETQPLL RPNTEESQLL NDEVRINVAN ETLIKSRWRS IKCLIIYLLG  60
   61 IVLLSFFGVS IVQYIRGHVP PTDVIEKNLV QVTNFKLVEF QLDGWKDNMG SDLNNDTGKY 120
  121 LQVSIHSQIW FDYDKWPGTE NDSDARSQRD WIRYINEKVL KTICIDLNNV TTFDGDLVFK 180
  181 NKLGDVVGME PICFNLAHRQ INNLQFKILV KPSIWKIVKV LKKFWNRDFE SLNIKSNLDM 240
  241 TIFKRKFGTR FNLLKLNDEI LDWKDIIDWE KISATPLRMI QNMIDGISLQ GFTLRDSSSD 300
  301 GFHADMRLNP ITILGGVDWL HLPPGTSIPF INWEIKLPDC NGEPAIAIPT LSCFNEPINL 360
  361 HHDKDNIVVC LQNEIEGPLP DELLYQECPQ NSLTPMSQIV NAVLNQNETV TFAARGHVLE 420
  421 DGIDNNSLIP ADMLEDIFQE ASFIPITTNA TFNSSELIQE FQINDLQLRW AARKKLSLVG 480
  481 TFLGFFDLSF YETHQQDRVR IDTIRGQIDL YHNDINFLNL PMKQWINSSS HILHDEDTGN 540
  541 TQMKLQFDLE NDDMEVVNSL ELTRTLNEIL FQGFTVIHFN ATIDASLTTA LGPWVLTGLA 600
  601 GEGDTLVT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle