| Protein: | AVL9 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 764 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AVL9.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [1..764] | [1..764] |
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0.0 | [1..474] | [1..437] |
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0.0 | [9..493] | [4..466] |
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0.0 | [58..499] | [45..454] |
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5.0E-66 | [57..244] | [1..168] |
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1.0E-57 | [10..167] | [48..193] |
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3.0E-52 | [7..151] | [57..198] |
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Region A: Residues: [1-169] |
1 11 21 31 41 51
| | | | | |
1 MDEHEEAVIF GICLVDFHHK RGPEIEYWYG LPEGTQSAEL WPNLPFQALP DGSHSFEETF 60
61 TYFTLLYDER RQRSPPNGAT DLSDDSINDN TTLFAISCSR QIKSDELVTK DKDVTRSTVQ 120
121 KAIVVISRQP IFGQIKDKLS IVTNAFFLQH DFGDRKIIQS LYENLKSIY
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [170-287] |
1 11 21 31 41 51
| | | | | |
1 TPASLVRNAE NRLYIGLCLR KILHDFKRNA LVLLKAIMLE KKIIVYGNDV EALCNLQFGL 60
61 ISLIPDLMSN LQDSGSPQLF QDISKLNVVD SFKSSNRESV LRFLGFPLPI FEKGGLFS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.642 | a.7.1 | Spectrin repeat |
| View | Download | 0.618 | a.74.1 | Cyclin-like |
| View | Download | 0.618 | a.74.1 | Cyclin-like |
| View | Download | 0.642 | a.7.1 | Spectrin repeat |
| View | Download | 0.797 | a.24.4 | Hemerythrin |
| View | Download | 0.689 | a.90.1 | Transcription factor STAT-4 N-domain |
| View | Download | 0.797 | a.24.4 | Hemerythrin |
| View | Download | 0.689 | a.90.1 | Transcription factor STAT-4 N-domain |
| View | Download | 0.627 | a.7.1 | Spectrin repeat |
| View | Download | 0.546 | d.68.6 | DNA-binding protein Sso10b (AlbA) |
| View | Download | 0.538 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.530 | d.110.4 | SNARE-like |
| View | Download | 0.511 | a.24.3 | Cytochromes |
| View | Download | 0.490 | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.481 | c.23.1 | CheY-like |
| View | Download | 0.477 | a.18.1 | T4 endonuclease V |
| View | Download | 0.466 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.464 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.430 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.420 | a.47.2 | t-snare proteins |
| View | Download | 0.413 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.394 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.388 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.379 | a.2.3 | Chaperone J-domain |
| View | Download | 0.367 | c.23.1 | CheY-like |
| View | Download | 0.366 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.355 | d.65.1 | Hedgehog/DD-pepidase |
| View | Download | 0.355 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.344 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.326 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.321 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.312 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.308 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.304 | a.47.2 | t-snare proteins |
| View | Download | 0.300 | a.48.1 | N-terminal domain of cbl (N-cbl) |
| View | Download | 0.298 | d.38.1 | Thioesterase/thiol ester dehydrase-isomerase |
| View | Download | 0.295 | a.26.1 | 4-helical cytokines |
| View | Download | 0.290 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.290 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.289 | d.208.1 | MTH1598-like |
| View | Download | 0.288 | a.1.1 | Globin-like |
| View | Download | 0.275 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.270 | a.74.1 | Cyclin-like |
| View | Download | 0.269 | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.258 | a.60.7 | 5' to 3' exonuclease, C-terminal subdomain |
| View | Download | 0.258 | a.1.1 | Globin-like |
| View | Download | 0.257 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.257 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.254 | d.65.1 | Hedgehog/DD-pepidase |
| View | Download | 0.247 | d.58.33 | Formylmethanofuran:tetrahydromethanopterin formyltransferase |
| View | Download | 0.247 | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.246 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.241 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.241 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.233 | a.24.11 | Bacterial GAP domain |
| View | Download | 0.232 | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.231 | d.55.1 | Ribosomal protein L22 |
| View | Download | 0.228 | a.25.1 | Ferritin-like |
| View | Download | 0.224 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.221 | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.216 | d.15.1 | Ubiquitin-like |
| View | Download | 0.214 | a.118.8 | TPR-like |
| View | Download | 0.214 | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.209 | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.204 | a.118.16 | Testis/brain RNA-binding protein (TB-RBP) |
| View | Download | 0.203 | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.201 | c.23.6 | Cobalamin (vitamin B12)-binding domain |
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Region A: Residues: [288-764] |
1 11 21 31 41 51
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1 PYTPLQQMND IRSERTLFFM IGSSNTLLAE QKEELCHIFV NTDNSTVDIL DKTLNPVLQL 60
61 SSHDKKWIES ISGIVSDTWN ENDDETPKNS QFEGSEDFIR WQFEDYLTGL LSSVKLSDYL 120
121 DLHKENDQAL KTIPEDMLNS NPVHLFNLNW VQSWKETQNF LIFNSRTDDR LFDLFPPKHI 180
181 YNGADTLSLL QQRFLATFHN LKRSSSNSSS NKNGHQSEED IKDQESIESK KSVSQISVNP 240
241 GKNTDKPAAN LWNSWKEYFN KPKNTANEDV TESTEDLKNR SKTSNAIQKA MMGLGLHYKP 300
301 DAETDQQSEE VGNSEDNEDD DTDEDSEDDD DDGGDDDDSE DDDDDDDGEG DENGDDGEGD 360
361 ENGDDGEGDE NGDKEDSQDF SNGFTDVTNI NTDHDKENEQ NFEGNAENFN EDETVADKDI 420
421 EGGPESNKNS DSKTDIYEND RNVEDSSKTR NTVKKSNEEG GANDAAIGNC VQDEEKL
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [429-597] |
1 11 21 31 41 51
| | | | | |
1 PVHLFNLNWV QSWKETQNFL IFNSRTDDRL FDLFPPKHIY NGADTLSLLQ QRFLATFHNL 60
61 KRSSSNSSSN KNGHQSEEDI KDQESIESKK SVSQISVNPG KNTDKPAANL WNSWKEYFNK 120
121 PKNTANEDVT ESTEDLKNRS KTSNAIQKAM MGLGLHYKPD AETDQQSEE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [598-764] |
1 11 21 31 41 51
| | | | | |
1 VGNSEDNEDD DTDEDSEDDD DDGGDDDDSE DDDDDDDGEG DENGDDGEGD ENGDDGEGDE 60
61 NGDKEDSQDF SNGFTDVTNI NTDHDKENEQ NFEGNAENFN EDETVADKDI EGGPESNKNS 120
121 DSKTDIYEND RNVEDSSKTR NTVKKSNEEG GANDAAIGNC VQDEEKL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
