| Protein: | REX3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 404 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for REX3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..404] | [1..404] |
|
|
5.0E-91 | [24..400] | [858..1238] |
|
|
4.0E-90 | [24..400] | [148..535] |
|
|
2.0E-80 | [20..395] | [56..397] |
|
|
3.0E-68 | [109..395] | [2..299] |
|
|
1.0E-66 | [25..395] | [611..1007] |
|
|
2.0E-53 | [111..404] | [7..311] |
|
|
6.0E-53 | [92..389] | [19..332] |
|
|
8.0E-53 | [124..403] | [235..527] |
|
Region A: Residues: [1-189] |
1 11 21 31 41 51
| | | | | |
1 MGSLLRPVDL VNQPLGFQER YKILQKLFKQ LQKAYAHTKG TNIDLERLAT RLEVHVAKNS 60
61 LSGQSYKFNM SILLRDVLKY KGDLSKIKIN GRPLKGAKPH LSSIGNANSI TTKSKAMEAL 120
121 KALILDSKVL EKNGYIVKEM QNKTNDDNST QLYAPCLRCS SNFKKTDIME KTLCRYHPLK 180
181 RIYNRDTKN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [190-404] |
1 11 21 31 41 51
| | | | | |
1 HQYPCCGETT DSVSFLRLGC KTFFHHVFRG ESYDELCKIS KFSSTDDIDG VENVLSLDCE 60
61 MAFTSLGYEM IRLTIVDFFT GKTLFDHVIQ PIGDIVDLNS DFSGVHEIDR TNCPTYKEAL 120
121 DVFLSENLIN KNSILIGHGL ENDLNVMRLF HNKVIDTAIL YSRTKFKVSL KNLAFEVLSR 180
181 KIQNGEHDSS QDAIATMDVV KVKIGISPSQ NKWEK
|
| Detection Method: | |
| Confidence: | 2.69897 |
| Match: | 1dpi__ |
| Description: | Exonuclease domain of prokaryotic DNA polymerase; DNA polymerase I (Klenow fragment) |
Matching Structure (courtesy of the PDB): |
|
