YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GIS3
Organism: Saccharomyces cerevisiae
Length: 502 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GIS3.

Description E-value Query
Range
Subject
Range
GIS3 - Protein of unknown function
GIS3_YEAST - Protein GIS3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIS3 PE=1 SV=1
0.0 [1..502] [1..502]

Back

Predicted Domain #1
Region A:
Residues: [1-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLDVNTNHT LMHDAHVHEH CLIKSIRDDG ALHSWSDSSK VFYPKSFYAT ATNKKNNKLA  60
   61 SASMNKTATS NRTVSDEIYF HSTKPQFDGQ GSAERTRTLT KRNSFKRTRI LKARDDSELL 120
  121 NENRSSLMTP SLSSVMSQVR KTNSAKTLSG ECPIHEGHLT QSIKRKFSEE AQSDCSSLSS 180
  181 SKLHPLTDDI ADAVDLQTPA IGDEVLAEPV VPKMKIININ DLDLFDDWEV KDLVDIFPPV 240
  241 YERRPRSSSA LSLVSASSDA KLRPTSVDFQ IIDKK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [276-502]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGKTSRRKSR SKSTTENMIY ENDLVELEQW PSASPSPETD GSIASSELLP NKRIRQKSLN  60
   61 TNFLKLYSIE TSCKRKSILP EVEVDDHLLK QLTYSEIRSL EIKKEPNVST NDIKLALITR 120
  121 KKLWSDMVHE TRNDLFGDST PWNLHFVATT SNTEPSQGRE SASEHATADL KSSLVRVHSD 180
  181 VKPWFNNGGT MLKPCGKLNL GKVTNKTSAP TREIQYVVKG WCDSRFL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [228-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WEVKDLVDIF PPVYERRPRS SSALSLVSAS SDAKLRPTSV DFQIIDKKGG KTSRRKSRSK  60
   61 STTENMIYE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [297-502]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDLVELEQWP SASPSPETDG SIASSELLPN KRIRQKSLNT NFLKLYSIET SCKRKSILPE  60
   61 VEVDDHLLKQ LTYSEIRSLE IKKEPNVSTN DIKLALITRK KLWSDMVHET RNDLFGDSTP 120
  121 WNLHFVATTS NTEPSQGRES ASEHATADLK SSLVRVHSDV KPWFNNGGTM LKPCGKLNLG 180
  181 KVTNKTSAPT REIQYVVKGW CDSRFL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle