| Protein: | NYV1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 253 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NYV1.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-55 | [1..253] | [1..253] |
|
|
5.0E-48 | [32..252] | [11..212] |
|
|
4.0E-47 | [32..251] | [11..213] |
|
Region A: Residues: [1-146] |
1 11 21 31 41 51
| | | | | |
1 MKRFNVSYVE VIKNGETISS CFQPFQKNEN YGTITSANEQ ITPVIFHNLI MDMVLPKVVP 60
61 IKGNKVTKMS MNLIDGFDCF YSTDDHDPKT VYVCFTLVDM PKILPIRILS GLQEYESNAT 120
121 NELLSSHVGQ ILDSFHEELV EYRNQT
|
| Detection Method: |  |
| Confidence: | 19.39794 |
| Match: | 1ifqA_ |
| Description: | Sec22b |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [147-253] |
1 11 21 31 41 51
| | | | | |
1 LNSSGNGQSS NGNGQNTISD IGDATEDQIK DVIQIMNDNI DKFLERQERV SLLVDKTSQL 60
61 NSSSNKFRRK AVNIKEIMWW QKVKNITLLT FTIILFVSAA FMFFYLW
|
| Detection Method: | |
| Confidence: | 18.522879 |
| Match: | 1sfcA_ |
| Description: | Synaptobrevin |
Matching Structure (courtesy of the PDB): |
|
