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View Structure Prediction Details

Protein: GEP5
Organism: Saccharomyces cerevisiae
Length: 293 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GEP5.

Description E-value Query
Range
Subject
Range
GEP5_YEAST - Genetic interactor of prohibitin 5, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / ...
GEP5 - Protein of unknown function, required for mitochondrial genome maintenance; detected in highly purif...
0.0 [1..293] [1..293]

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Predicted Domain #1
Region A:
Residues: [1-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQVNALLL PVIESTPLHQ ITKVALTTTL TSKQSDYKFK EIAVPLTKSL QLYEKAQRRQ  60
   61 DLRASLKALE SIIYQTHFQW NNPLPRHAHL FQKHYHFLLT HWPFENHRDL VDSIAVNNGK 120
  121 LNSTSSRSVW LKADWITLFN VKNPWVQTPP SLMRLSGTDL DTFTPERIFL INSLGNHYKF 180
  181 LIANSHLSYN HKKYPSPGVQ IPVRNALGEV SPAKQIAQLF ARQLSHIYKS LFIENPPLSP 240
  241 ENELALTAVF YDETVERRLR RLYMRACARA YTTTNADSTT EPLMFHCTRW EVD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle