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View Structure Prediction Details

Protein: EMP70
Organism: Saccharomyces cerevisiae
Length: 667 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EMP70.

Description E-value Query
Range
Subject
Range
gi|151941250 - gi|151941250|gb|EDN59628.1| conserved protein [Saccharomyces cerevisiae YJM789]
TMN1_YEAST - Transmembrane 9 superfamily member 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMP...
EMP70 - Protein with a role in cellular adhesion and filamentous growth; similar to Tmn2p and Tmn3p; member ...
0.0 [1..667] [1..667]
TMN7_ARATH - Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana GN=TMN7 PE=2 SV=1
0.0 [7..667] [12..641]
gi|114650498 - gi|114650498|ref|XP_001147580.1| PREDICTED: transmembrane 9 superfamily member 2 isoform 3 [Pan trog...
TM9SF2 - transmembrane 9 superfamily member 2
0.0 [9..667] [15..663]
FBpp0307148, CG9... - This gene is referred to in FlyBase by the symbol Dmel\CG9318 (CG9318, FBgn0032880). It is a protein...
0.0 [1..667] [3..659]
tag-123 - status:Partially_confirmed UniProt:O17388 protein_id:AAB71307.1
0.0 [7..667] [7..655]

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Predicted Domain #1
Region A:
Residues: [1-667]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYKMAHVQL LLLYFFVSTV KAFYLPGVAP TTYRENDNIP LLVNHLTPSM NYQHKDEDGN  60
   61 NVSGDKENFL YSYDYYYNRF HFCQPEKVEK QPESLGSVIF GDRIYNSPFQ LNMLQEKECE 120
  121 SLCKTVIPGD DAKFINKLIK NGFFQNWLID GLPAAREVYD GRTKTSFYGA GFNLGFVQVT 180
  181 QGTDIEATPK GAETTDKDVE LETRNDRNMV KTYELPYFAN HFDIMIEYHD RGEGNYRVVG 240
  241 VIVEPVSIKR SSPGTCETTG SPLMLDEGND NEVYFTYSVK FNESATSWAT RWDKYLHVYD 300
  301 PSIQWFSLIN FSLVVVLLSS VVIHSLLRAL KSDFARYNEL NLDDDFQEDS GWKLNHGDVF 360
  361 RSPSQSLTLS ILVGSGVQLF LMVTCSIFFA ALGFLSPSSR GSLATVMFIL YALFGFVGSY 420
  421 TSMGIYKFFN GPYWKANLIL TPLLVPGAIL LIIIALNFFL MFVHSSGVIP ASTLFFMVFL 480
  481 WFLFSIPLSF AGSLIARKRC HWDEHPTKTN QIARQIPFQP WYLKTIPATL IAGIFPFGSI 540
  541 AVELYFIYTS LWFNKIFYMF GFLFFSFLLL TLTSSLVTIL ITYHSLCLEN WKWQWRGFII 600
  601 GGAGCALYVF IHSILFTKFK LGGFTTIVLY VGYSSVISLL CCLVTGSIGF ISSMLFVRKI 660
  661 YSSIKVD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 1000.0
Match: PF02990
Description: Endomembrane protein 70

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle