Protein: | RGR1 |
Organism: | Saccharomyces cerevisiae |
Length: | 1082 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RGR1.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..1082] | [1..1082] |
|
0.0 | [79..427] | [3..324] |
|
0.0 | [79..427] | [3..324] |
|
5.0E-99 | [66..416] | [25..340] |
|
8.0E-98 | [70..416] | [35..346] |
|
9.0E-88 | [104..424] | [26..323] |
|
4.0E-40 | [282..429] | [1..127] |
Region A: Residues: [1-224] |
1 11 21 31 41 51 | | | | | | 1 MTTTIGSPQM LANEERLSNE MHALKNRSEQ NGQEQQGPVK NTQLHGPSAT DPETTATQKE 60 61 SLEMVPKDTS AATMTSAPPP ALPHVEINQV SLALVIRNLT VFTMKELAQY MKTNVHTQAN 120 121 EPNSAKKIRF LQLIIFLRTQ FLKLYVLVKW TRTIKQNNFH VLIDLLNWFR TTNMNVNNCI 180 181 WALKSSLNSM TNAKLPNVDL VTALEVLSLG RPNLPTHNFK LSGV |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [225-443] |
1 11 21 31 41 51 | | | | | | 1 SNSMDMVDGM AKVPIGLILQ RLKDLNLTVS IKIALMNIPK PLNSYHIKNG RIYFTVPNEF 60 61 EIQLSTVNRQ SPLFFVDLKL LFNTEAEQTV SAVTEATSTN GDSENNEENS SSNGNNLPLN 120 121 KPRLEKLINE ILLKSNDPLL SLYNFLHKYV LTLQLYMVHR EFLKLANGGK FSKSNLIHNY 180 181 DSKKSTITVR YWLNGKMDSK GKITIGIQRT TESLILKWD |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [444-1082] |
1 11 21 31 41 51 | | | | | | 1 NQSASRAKNM PVIYNNIVSN IEGILDEIMF NHARIIRSEL LARDIFQEDE ENSDVLLFQL 60 61 PTTCVSMAPI QLKIDLLSGQ FYFRNPTPLL SNYASKINRA EGPEELARIL QQLKLDKIIH 120 121 VLTTMFENTG WSCSRIIKID KPIRTQVNTG GESVVKKEDN KYAIAGNSTT NSDVSLLLQR 180 181 DLFIRLPHWP LNWYLILSII SSKTSCVVEK RIGKIVSQRG KWNLKYLDNS NVMTVKLESI 240 241 TYQKIMILQR TILNRIINHM LIDSLNQLEI RNKICSSEMI NEQKLPQYII QGSNTNDNIS 300 301 IITLELESFL EGSKALNSIL ESSMFLRIDY SNSQIRLYAK FKRNTMMIQC QIDKLYIHFV 360 361 QEEPLAFYLE ESFTNLGIIV QYLTKFRQKL MQLVVLTDVV ERLHKNFESE NFKIIALQPN 420 421 EISFKYLSNN DEDDKDCTIK ISTNDDSIKN LTVQLSPSNP QHIIQPFLDN SKMDYHFIFS 480 481 YLQFTSSLFK ALKVILNERG GKFHESGSQY STMVNIGLHN LNEYQIVYYN PQAGTKITIC 540 541 IELKTVLHNG RDKIQFHIHF ADVAHITTKS PAYPMMHQVR NQVFMLDTKR LGTPESVKPA 600 601 NASHAIRLGN GVACDPSEIE PILMEIHNIL KVDSNSSSS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.