| Protein: | SPT8 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 602 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPT8.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [98..600] | [995..1493] |
|
|
0.0 | [164..594] | [830..1257] |
|
Region A: Residues: [1-66] |
1 11 21 31 41 51
| | | | | |
1 MDEVDDILIN NQVVDDEEDD EEMLSGLEND SKQDLEGNDD GGEDEEDDDD DDEDDDDDED 60
61 EREDDD
|
| Detection Method: |  |
| Confidence: | 7.13 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [67-124] |
1 11 21 31 41 51
| | | | | |
1 EQEDDDGEDD AARMDKTATP TNEHQHDEQK AAAAGAGGAG DSGDAVTKIG SEDVKLSD
|
| Detection Method: | |
| Confidence: | 7.13 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [125-491] |
1 11 21 31 41 51
| | | | | |
1 VDGGVGSREA SSSTHEASAN GEVYEYYKHM LNAAQIADSY NIYPTAAIPI QTHVNALAVS 60
61 RGLKYLFLGG SDGYIRKYDL LNTLEGKLSL TILQKHSLAE SIQNAGILQS YWENEIPQKK 120
121 SEMKLSANKT DYEPKVSPVH SLEVQSECLF ILSGLQNGGI TMQGVRYMEG SIAHYFKGRN 180
181 GHTQIVNILR LNGQEDRFLS GSWDKRLLEW DLQTGDIVNE FKKSRSELSS LEMRPLYSSV 240
241 DVSGNVNSGK ENENADDDMD SLFGDEDEDE KQDAGNEPVE TGDGSNGEEN KEQISEESLN 300
301 IVYDESVFMT SGLNGSVHIW DRRMTQSPAL SLERGAGVPP WCLSACWGVD GDHVYAGRRN 360
361 ACVEQFD
|
| Detection Method: | |
| Confidence: | 84.154902 |
| Match: | 1gg2B_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [492-602] |
1 11 21 31 41 51
| | | | | |
1 LKMPSKPIHN LKLPSISGPV SCVKAMPNNK HLLCASRDNI RLYNVEIAVD ASNSTTKSSK 60
61 VPFLIVPGHH GGIISNLYLD PTSRFIISTS GNRGWQGNST DTTLIYDIDL E
|
| Detection Method: | |
| Confidence: | 4.30103 |
| Match: | 1kb0A_ |
| Description: | Quinoprotein alcohol dehydrogenase, C-terminal domain; Quinoprotein alcohol dehydrogenase, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [379-493] |
1 11 21 31 41 51
| | | | | |
1 ADDDMDSLFG DEDEDEKQDA GNEPVETGDG SNGEENKEQI SEESLNIVYD ESVFMTSGLN 60
61 GSVHIWDRRM TQSPALSLER GAGVPPWCLS ACWGVDGDHV YAGRRNACVE QFDLK
|
| Detection Method: | |
| Confidence: | 3.62 |
| Match: | 2hesX |
| Description: | No description for 2hesX was found. |
|
Region A: Residues: [494-602] |
1 11 21 31 41 51
| | | | | |
1 MPSKPIHNLK LPSISGPVSC VKAMPNNKHL LCASRDNIRL YNVEIAVDAS NSTTKSSKVP 60
61 FLIVPGHHGG IISNLYLDPT SRFIISTSGN RGWQGNSTDT TLIYDIDLE
|
| Detection Method: | |
| Confidence: | 69.69897 |
| Match: | 2ovpB |
| Description: | No description for 2ovpB was found. |
