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View Structure Prediction Details

Protein: IES3
Organism: Saccharomyces cerevisiae
Length: 250 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IES3.

Description E-value Query
Range
Subject
Range
IES3_YEAST - Ino eighty subunit 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IES3 PE=1 SV=1
IES3 - Subunit of the INO80 chromatin remodeling complex
0.0 [1..250] [1..250]

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Predicted Domain #1
Region A:
Residues: [1-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFEDLLATN KQVQFAHAAT QHYKSVKTPD FLEKDPHHKK FHNADGLNQQ GSSTPSTATD  60
   61 ANAASTASTH TNTTTFKRHI VAVDDISKMN YEMIKNSPGN VITNANQDEI DISTLKTRLY 120
  121 KDNLYAMNDN FLQAVNDQIV TLNAAEQDQE TEDPDLSDDE KIDILTKIQE NLLEEYQKLS 180
  181 QKERKWFILK ELLLDANVEL DLFSNRGRKA SHPIAFGAVA IPTNVNANSL AFNRTKRRKI 240
  241 NKNGLLENIL 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle