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View Structure Prediction Details

Protein: YLR042C
Organism: Saccharomyces cerevisiae
Length: 161 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YLR042C.

Predicted Domain #1
Region A:
Residues: [1-161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKISQFGSLA FAPIVLLQLF IVQAQLLTDS NAQDLNTALG QKVQYTFLDT GNSNDQLLHL  60
   61 PSTTSSSIIT GSLAAANFTG SSSSSSIPKV TSSVITSINY QSSNSTVVTQ FTPLPSSSRN 120
  121 ETKSSQTTNT ISSSTSTGGV GSVKPCLYFV LMLETIAYLF S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.576 d.129.3 Bet v1-like
View Download 0.470 d.129.3 Bet v1-like
View Download 0.377 d.17.1 Cystatin/monellin
View Download 0.366 d.2.1 Lysozyme-like
View Download 0.366 d.2.1 Lysozyme-like
View Download 0.363 a.152.1 Antioxidant defence protein AhpD
View Download 0.362 a.1.1 Globin-like
View Download 0.321 a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.319 a.24.3 Cytochromes
View Download 0.309 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.247 c.52.1 Restriction endonuclease-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle