YRC Public Data Repository - Protein Structure Prediction

Protein:	TEN1
Organism:	Saccharomyces cerevisiae
Length:	160 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TEN1.

Description	E-value	Query Range	Subject Range
gi\|190406051 - gi\|190406051\|gb\|EDV09318.1\| hypothetical protein SCRG_04998 [Saccharomyces cerevisiae RM11-1a] TEN1 - Protein that regulates telomeric length; protects telomeric ends in a complex with Cdc13p and Stn1p gi\|151941178 - gi\|151941178\|gb\|EDN59556.1\| Telomeric pathways with STn1 [Saccharomyces cerevisiae YJM789] gi\|207343212 - gi\|207343212\|gb\|EDZ70744.1\| YLR010Cp-like protein [Saccharomyces cerevisiae AWRI1631] TEN1_YEAST - Telomere length regulation protein TEN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=...	4.0E-92	[1..160]	[1..160]

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Predicted Domain #1

Region A:
Residues: [1-160]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQLVLDLKC LKDKIATNYD IHNNVYGGNG MEPNIIHPSK RFRIVVRLVD FLFCKSDEEF  60
   61 IKGFFCQMIV RNLHCLNSTN GAEEMRLYMS ERLFSAHKDD LRLINGQVLD VRIGVWYGIH 120
  121 QSPPIFEIID FKILSRNDVR DFCEFVKSPL GEKFLNISNS

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Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits